Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma01g01504 ATGTCTTCTTCAATTCGTCCCTCACTTTCTTCCTTCATGTTGCCCTCCCTCGCCTCTTGCAACCCTTCTCAAAAGCTCTCTCTTTTTCGTCTTGGTAGCGGCATTAGACAGTTTCATAAGTTTGGCCTCAAAGCTTCTAGGTTTTTGAGACATGATGATAAGTGCATGAGAGTGATGGCATTCGGAAACATGTCCACAGCTGCTACACAAGAAAATGTGCTAGATTGGGTCAAACATGACAAGAGAAGAATGCTTCATGTTGTGTATCGTGTTGGGGACTTGGACAAGAGCATAAAATTTTATAGAGAGTGCCTTGGAATGAAGTTGCTCAGAAAGCGTGACATGCAAGAGCAGAAATATACCAATGCCTTTCTTGGATATGGGCCTGAGGATGCACACTTTGTTGTTGAACTGACATACAGTTACGGGATTGAGAAGTATGACATTGGAGATGGATTTGGCCATTTTGGTATTGCTATTGATGATATTTCAAGAATAGTGGAACTTGTTAGAGCCAAGGGTGGAAAAATTACTAGAGAGCCTAGTCCTGTCAAGGGAGGCAACACAACAATTGCATATATTGAAGATCCTGATGGTTATCAATTTGAACTTTTGGAAAGGGTTCCCTCTCCGGAGCCTTTGTGCAAAGTAATGCTTCGAGTGGGTGATCTTGATCGTTCCATTAAATTTTATGAGAAGGCTTTTGGTATGGAGCTACTTCGAACACAAGATGATCCAGAATCTAAGAGTACAATAGGAATACTGGGTTATGGTCCAGAGGAAAAAAATACTGTCCTGGAATTGACTTACAACTATGGAGTCACAAATTATGATAAAGGAGATGCTTATGCTCAGATTACAATAGACACAGATGATGTGTACAAAACTGCAGAAGCAATTAAACTTGCAGGAGGAAAGATTACTCGAGAACCTGGACCGATACCCGTTATGAAGACAAAGATCACATCGTGTGTTGATCCTGATGGTTGGAAAACTGTTTTTGTAGATAATGTTGACTTTCGTAGGGAGTTGGAGTAG 1038 0.4094 MSSSIRPSLSSFMLPSLASCNPSQKLSLFRLGSGIRQFHKFGLKASRFLRHDDKCMRVMAFGNMSTAATQENVLDWVKHDKRRMLHVVYRVGDLDKSIKFYRECLGMKLLRKRDMQEQKYTNAFLGYGPEDAHFVVELTYSYGIEKYDIGDGFGHFGIAIDDISRIVELVRAKGGKITREPSPVKGGNTTIAYIEDPDGYQFELLERVPSPEPLCKVMLRVGDLDRSIKFYEKAFGMELLRTQDDPESKSTIGILGYGPEEKNTVLELTYNYGVTNYDKGDAYAQITIDTDDVYKTAEAIKLAGGKITREPGPIPVMKTKITSCVDPDGWKTVFVDNVDFRRELE 345
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma01g01504 345 ProSitePatterns Glyoxalase I signature 1. 86 107 IPR018146 GO:0004462|GO:0046872
Gma01g01504 345 PANTHER LACTOYLGLUTATHIONE LYASE-LIKE PROTEIN 9 345 - -
Gma01g01504 345 SUPERFAMILY Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase 215 337 IPR029068 -
Gma01g01504 345 Gene3D - 210 345 IPR029068 -
Gma01g01504 345 PANTHER LACTOYLGLUTATHIONE LYASE 9 345 - -
Gma01g01504 345 Pfam Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 217 331 IPR004360 -
Gma01g01504 345 Pfam Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 84 204 IPR004360 -
Gma01g01504 345 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 20 - -
Gma01g01504 345 SUPERFAMILY Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase 83 209 IPR029068 -
Gma01g01504 345 TIGRFAM glyox_I: lactoylglutathione lyase 71 215 IPR004361 GO:0004462|GO:0046872
Gma01g01504 345 TIGRFAM glyox_I: lactoylglutathione lyase 214 340 IPR004361 GO:0004462|GO:0046872
Gma01g01504 345 Gene3D - 55 207 IPR029068 -
Gma01g01504 345 ProSiteProfiles Vicinal oxygen chelate (VOC) domain profile. 83 207 IPR037523 -
Gma01g01504 345 ProSiteProfiles Vicinal oxygen chelate (VOC) domain profile. 213 337 IPR037523 -
Gma01g01504 345 CDD GlxI_Ni 84 205 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma01g01504 Gma-Chr1 50379821 50383072 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma01g01504 216 334 Calmodulin-binding Proteins AT1G08110 26.207 5.84e-07 48.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma01g01504 K01759 - gmx:100802155 701.819