Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma01g01481 ATGAGCATAAACTCTAGTTGTAGCATAAGTGGTGGGAGTAGTAGCGGTGGAAACAATAATAGTAGTGGTGGTAGCCCTTGTGGGGCGTGCAAGTTTTTGAGGCGAAAGTGCATGCCCGGTTGCATCTTTGCTCCGTACTTTGATTCGGAGGAAGGTGCCACGCACTTTGCCGCGGTGCATAAGGTTTTTGGTGCTAGTAACATTTCCAAGTTACTGCTTAACATTCCGGTGCATAAGAGGCTTGATGCGGTGGTCACAATTTGCTATGAAGCTCAAGCGAGGCTTAGAGACCCCGTGTATGGTTGTGTTGCTCATATCTTCGCTCTTCAGCAACAGGTGATGAGTTTACAAGCAGAACTCTCCTACTTACAAGGCCACCTTGCAACCCTAGAGTTACCCCAACCACCACCACCTTCTTCACCACAAGCAACCACCATGGCACCTCCTCCATTGATCTCAATAGCTGAGTTCATCCCATCATCAGCCTTAGCCTCTTCAACCGTGCCACCCACATATGACCTCTCTTCACTTTTTGATCCAATGGCCCAGACTCCTTCGTGGGCTGTGCAGCCTAGGCCCATAGAGTCACGTCAATATGTGGGTAGCGGGCCTAGTGGCCCATCGGCCACTATTGCTAGTGGTGGTGATCTTCAAGCATTGGCTCGTGAGCTTTTGCATAGACATGGATCTGCCCCAGTTGTTGCATGCTCTAATCCCTCTTCATCTTACCCGATTTCCAAATGA 744 0.496 MSINSSCSISGGSSSGGNNNSSGGSPCGACKFLRRKCMPGCIFAPYFDSEEGATHFAAVHKVFGASNISKLLLNIPVHKRLDAVVTICYEAQARLRDPVYGCVAHIFALQQQVMSLQAELSYLQGHLATLELPQPPPPSSPQATTMAPPPLISIAEFIPSSALASSTVPPTYDLSSLFDPMAQTPSWAVQPRPIESRQYVGSGPSGPSATIASGGDLQALARELLHRHGSAPVVACSNPSSSYPISK 247
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma01g01481 247 MobiDBLite consensus disorder prediction 1 24 - -
Gma01g01481 247 PANTHER LOB DOMAIN-CONTAINING PROTEIN 18 1 230 - -
Gma01g01481 247 PANTHER LOB DOMAIN CONTAINING PROTEIN 1 230 - -
Gma01g01481 247 ProSiteProfiles LOB domain profile. 25 127 IPR004883 -
Gma01g01481 247 Pfam Lateral organ boundaries (LOB) domain 26 124 IPR004883 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma01g01481 Gma-Chr1 49989383 49994103 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma01g01481 29 232 AS2 family AT2G45420 60.766 2.89e-79 238
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Gma01g01481 LOB 2e-38 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma18g02045 18 53818761 53822819 Gma01g01481 01 49989383 49994103 PCT
Gma09g02458 09 49936397 49939867 Gma01g01481 01 49989383 49994103 PCT
Gma01g01481 01 49989383 49994103 Gma18g02045 18 53818761 53822819 PCT
Gma01g01481 01 49989383 49994103 Gma09g02458 09 49936397 49939867 PCT