Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma01g01480 ATGGATTGTGGGGGTAACAAGATTGGTGGAAGTGATAGGGGTGGGCCTTGTGGTGCCTGCAAGTTTCTGAGAAGAAAGTGTGTGAAGGGTTGCATATTTGCACCATACTTTGACTCAGACCAAGGAACGGCTCATTTTGCTGCGGTGCACAAGGTGTTTGGTGCTAGCAATGCCTCTAAGTTACTCATGCGGATTCCAGCACACAAAAGACTTGATGCTGTTGTTACTCTTTGCTATGAGGCTTTGGCTAGGGCTAGAGACCCCGTTTATGGTTGTGTTGGTCACCTCTTTGCTCTTCAACAACAGGTCATGAACTTGCAGGCTGAGTTAACCTATGTCCAGGCTCGTCTCGCGACGATGCAGCGACTGCCAATGCAAGTGGCTCCTCTTCCACACCCTCAAAGCTCTTCACCACCACCAACCTTTCATTCCTCAGATCACTTGGCATCAAATGCTGACTTGCAAAGTGCCCCTATGATGCACTTTGATCCTCTTCAGCCACATTCAGCATCATTAGAGTTAAGCAGCGTCGTTTTCAATCAATCAGATCAACAACTCGAGGATAGGGAACTCCAAGTTTTGGCACGGGAATTTGTGAGCAAATACTTGCCCGGAGTAAGGTTCCAGCAATACAACTCTCCCTGA 645 0.4806 MDCGGNKIGGSDRGGPCGACKFLRRKCVKGCIFAPYFDSDQGTAHFAAVHKVFGASNASKLLMRIPAHKRLDAVVTLCYEALARARDPVYGCVGHLFALQQQVMNLQAELTYVQARLATMQRLPMQVAPLPHPQSSSPPPTFHSSDHLASNADLQSAPMMHFDPLQPHSASLELSSVVFNQSDQQLEDRELQVLAREFVSKYLPGVRFQQYNSP 214
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma01g01480 214 Pfam Lateral organ boundaries (LOB) domain 16 114 IPR004883 -
Gma01g01480 214 PANTHER LOB DOMAIN-CONTAINING PROTEIN 19 11 204 - -
Gma01g01480 214 PANTHER LOB DOMAIN CONTAINING PROTEIN 11 204 - -
Gma01g01480 214 ProSiteProfiles LOB domain profile. 15 117 IPR004883 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma01g01480 Gma-Chr1 49959521 49964604 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma01g01480 14 209 AS2 family AT4G00210 55.189 6.28e-70 211
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Gma01g01480 LOB 2.6e-37 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma01g01480 - - gmx:100791377 424.091