Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma01g01476 ATGGGTCTGGATGTGGACGCCCTCAACGGCATCAACAAGGAAGAGGGTAGTGGGGAACCTTCACGGGATCAATCAAAGTTGTATATCTTTCTTGAGATTGTAACAAAAGGTTCCCTTAGAAGCCTCTATCAGAAGTATACTCTTCGAGATTCCCAAGTATCTTTCTATACGAGACAAATTCTACATGGTTTGAAATATCTTCATGACCGAAATGCGGTTCATAGGGATATCATATGTGCAAATATATTGGTGGATGCAAGTGGATTTGTCAAGCTTGCAGATTTTGGATTGGCAAAGTTTGAAATTGATTATGTTGGTCAAAGTGAATTGGCATTAAATGAGGATCTATATAACACAAAGTACAAGGACAAGTTGGAGTTGTCTTATAAGGGACTTATTCATGAAGTGTTCACCACAATATTATGTGGCTTGTCTAGTGACTAA 444 0.3851 MGLDVDALNGINKEEGSGEPSRDQSKLYIFLEIVTKGSLRSLYQKYTLRDSQVSFYTRQILHGLKYLHDRNAVHRDIICANILVDASGFVKLADFGLAKFEIDYVGQSELALNEDLYNTKYKDKLELSYKGLIHEVFTTILCGLSSD 147
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma01g01476 147 PANTHER MAP KINASE KINASE KINASE SSK2-RELATED-RELATED 23 100 - -
Gma01g01476 147 Gene3D Transferase(Phosphotransferase) domain 1 16 122 - -
Gma01g01476 147 ProSiteProfiles Protein kinase domain profile. 1 147 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma01g01476 147 SUPERFAMILY Protein kinase-like (PK-like) 23 101 IPR011009 -
Gma01g01476 147 MobiDBLite consensus disorder prediction 1 21 - -
Gma01g01476 147 SMART serkin_6 10 137 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma01g01476 147 Pfam Protein kinase domain 22 100 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma01g01476 147 PANTHER MAP KINASE KINASE KINASE-LIKE PROTEIN 23 100 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma01g01476 Gma-Chr1 49906886 49909110 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma01g01476 21 99 MAP Kinase Kinase Kinase AT4G08500 74.684 7.42e-35 125
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Gma01g01476 Pkinase 1.1e-21 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma01g01476 K13414 - gmx:100819999 144.05