Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma01g01464 ATGGGAGTCGCCCTTTCTATCATCGCATTCCCTATGCTCGCGCGCATCCTAGCGGGGCTCAAGCTCCTCACCACGCGTGTGGGAGAGATCGCCATGGCCGTAGTGGCGTTCAACGATCTGTGGACTTGTGGGTTGAGGCAGAGTTTAGACCCTGCTATTGATCCTCCGCGACAGGATGTGAAGTCATTGGACAAAACCCAAGGGATGAAGATAAGTGGATCGAACGGTGGTGGGAAATCAAGTTTACTTAGGTCAATTTGTGTTGCTGCACTACTTGGGATATGTGGACTCATGGTTCCTGCAGAATCAGCCTTAATTCCTTATTTTGACTCCATCACGCTTCATATGAAGTCATATGATAGTCCAGTAGATAAGAAGAGTTCCTTTCAGTCAACCACTGGCATTAATGGTCCCCAAGATGAAAGTGTTGCACAACAAAAGGTTGAAGCCACTGCAGAAAATAATGTTGCTAGTAATCATTCAAGTGGTGATGTTGCTTGCATTCAAAGAAATATGGAATTAATTCAGAAAGGAAGTGATGCACAGGTTAATATTGATCATTGTTGGTTGGAAGATAAAGTATTGTCATTGATTGGAGGGGTGATAGCCCAAGGACGACCACAATCACCATTGTTGCATCCACTTCATGGCCCAGAGGGGGAGGGGTTTGTCAGAAGAGCTAGAGTACAAGTCTTGTCAAACCCAAAGTTAGAGTTGGAAGATGAAGTGGCCAAGTTACCCATTGGACAAACTTCAAGAGAAATCATAATTCTAGCCCTGAAGCTCTTGAACTCACTTGAATCACACCTAGAAGTCAAGAATCCATGA 828 0.4481 MGVALSIIAFPMLARILAGLKLLTTRVGEIAMAVVAFNDLWTCGLRQSLDPAIDPPRQDVKSLDKTQGMKISGSNGGGKSSLLRSICVAALLGICGLMVPAESALIPYFDSITLHMKSYDSPVDKKSSFQSTTGINGPQDESVAQQKVEATAENNVASNHSSGDVACIQRNMELIQKGSDAQVNIDHCWLEDKVLSLIGGVIAQGRPQSPLLHPLHGPEGEGFVRRARVQVLSNPKLELEDEVAKLPIGQTSREIIILALKLLNSLESHLEVKNP 275
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma01g01464 275 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 67 125 IPR027417 -
Gma01g01464 275 MobiDBLite consensus disorder prediction 123 159 - -
Gma01g01464 275 PANTHER DNA MISMATCH REPAIR PROTEIN MUTS FAMILY MEMBER 72 130 IPR045076 GO:0005524|GO:0006298|GO:0030983|GO:0140664
Gma01g01464 275 Gene3D - 1 48 IPR038770 -
Gma01g01464 275 Pfam MutS domain V 71 130 IPR000432 GO:0005524|GO:0006298|GO:0030983
Gma01g01464 275 Gene3D - 49 134 IPR027417 -
Gma01g01464 275 PANTHER DNA MISMATCH REPAIR PROTEIN MSH1, MITOCHONDRIAL 72 130 - -
Gma01g01464 275 MobiDBLite consensus disorder prediction 56 76 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma01g01464 Gma-Chr1 49779682 49785960 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma01g01464 1 40 Antiporter Super Family AT5G41610 70.000 1.42e-09 56.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma01g01464 - - gmx:732638 117.857