Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma01g01456 ATGCCACGAGGAAGTTTGAAGAATCACCTCTTCAGAAGTCTAACATCACTGCCATGGGGAACAAGATTAAAAATCGCAACAGGTGCTGCCAAAGGCCTTTCCTTCTTGCATGGAGCTGAGAAACCAGTCATTTATAGAGACTTCAAGACTTTCAATGTTTTGCTTGATTCAGAGTTCACGACTAAATTGTCAGATTTTGGACTTGTAAAAGTGGGGCCAGAGGGATCAAACACACATGTTTCGACTAAAGTCATGGGAACTTATGGATATGCAGCCCCAGAATACATCTCAACAGGTTGCAAAGACTTGATGTCGAAGGTGGAAATGACAACATTGGTGAGTGTCTCATGCAACCGAATGTCTCCAAGTTTCTCTCTGACGACACCATCCAGTGCTCAAGATAGTCTGAGTGATAATACCATTTTTGAAGGGAAGCAAACTGTGCGTGTCTACAATGGCATGAATGATGGCATTCTTGTGTATCTCCATTGTCGATCCAAGGACAATGATCTTGGCCAACATGTTCTTGCCTTTGGAGAGTTCCAAAAATGGTCCTTCAATGATAACCTTTTTGGCACAACTCTTTTTTGGTGCACAATGAATGCAAGCAATGTGCATGCAAGTTTTGAAGTTTATCGTGCCAAAACTGAGGAAAATAAGTGTGATACCCAATGCAATAGAATTCTAAAAAAAGACGGAGGCTATTTTTTTAATCAGTTCGTTGGCCATTGGGAGAAGAGATTGTCATGGCATATTCCTAAAACACCATCCTTTTAA 777 0.4106 MPRGSLKNHLFRSLTSLPWGTRLKIATGAAKGLSFLHGAEKPVIYRDFKTFNVLLDSEFTTKLSDFGLVKVGPEGSNTHVSTKVMGTYGYAAPEYISTGCKDLMSKVEMTTLVSVSCNRMSPSFSLTTPSSAQDSLSDNTIFEGKQTVRVYNGMNDGILVYLHCRSKDNDLGQHVLAFGEFQKWSFNDNLFGTTLFWCTMNASNVHASFEVYRAKTEENKCDTQCNRILKKDGGYFFNQFVGHWEKRLSWHIPKTPSF 258
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma01g01456 258 Pfam Plant self-incompatibility protein S1 147 250 IPR010264 -
Gma01g01456 258 Gene3D Transferase(Phosphotransferase) domain 1 1 109 - -
Gma01g01456 258 ProSitePatterns Serine/Threonine protein kinases active-site signature. 43 55 IPR008271 GO:0004672|GO:0006468
Gma01g01456 258 Pfam Protein kinase domain 3 109 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma01g01456 258 PANTHER SERINE/THREONINE-PROTEIN KINASE PBL15-RELATED 1 109 - -
Gma01g01456 258 ProSiteProfiles Protein kinase domain profile. 1 196 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma01g01456 258 SUPERFAMILY Protein kinase-like (PK-like) 1 99 IPR011009 -
Gma01g01456 258 PANTHER OS01G0588500 PROTEIN-RELATED 1 109 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma01g01456 Gma-Chr1 49527250 49531084 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma01g01456 1 99 Glycoside Hydrolase AT3G07070 59.223 2.29e-33 123
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Gma01g01456 Pkinase 2.1e-15 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma01g01456 - - gmx:106794334 230.72