Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma01g01452 ATGTTGAAGTCCCTGGTCACAATTATTGTATTCTTGTTGATTGTCCGTGCTCAAGATGATTTGGGTGATGATTCAATTTTTGACGGGAGGAAAACTGTGTGTGTTTTAAATGGGATGAATGATGACATTCTTGTGTATCTCCATTGTCAGTCGAGGTACAATGATCTTGGCCAACATGTTCTTGCCGTTGGAGAGTACCAAGAATGGTCCTTTAGAGATAATATTCGTGACACAACTCTCTTTTGGTGCACGATGGATGCAGGCAAGGTGCATGCGAGTTTTCAAGTTTATCGTGCCGAAATTGAGGAGAAGTTATGTGATTCCCAATGCAATCGAACTCTAACAAACGATGGAGGCTATTTTTATGATCAGTTCCATGGCTATTGGGAGAAGAGATTATCATGGTATATTCCATAA 417 0.4029 MLKSLVTIIVFLLIVRAQDDLGDDSIFDGRKTVCVLNGMNDDILVYLHCQSRYNDLGQHVLAVGEYQEWSFRDNIRDTTLFWCTMDAGKVHASFQVYRAEIEEKLCDSQCNRTLTNDGGYFYDQFHGYWEKRLSWYIP 138
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma01g01452 138 Pfam Plant self-incompatibility protein S1 32 135 IPR010264 -
Gma01g01452 138 PANTHER - 18 121 IPR010264 -
Gma01g01452 138 PANTHER PUMILIO HOMOLOG 15-LIKE 18 121 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma01g01452 Gma-Chr1 49467427 49467843 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma01g01452 8 112 Carbohydrate Esterase AT3G16970 26.606 1.64e-07 45.8