Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma01g01445 ATGAAGATGCATGAAGAGAGGGAGGCCATGGCTTGGCGAAGAGGACCCGTTGCGTTCCATCCTGCAGCCATGGCTGATAGCAATTCGGGTGGTCACTGCAAGGAGGTTCGTGCTTGCAAGTTGCAAGGTGCTCAAGGTGGTGACTTTCAGTCCGTTGTTCACAAGTACTATTCCTATAATTCAGCAAATTACCTCTCATTTGAACTCAAAATTCTCTATTTAGTTGCAAGGCGTAGGGAGTACCTCTGCCTTGGTGGTTTGCTTTCTTCTGGGATGTCCATTCATCAATTGCACTCTTCAAGTTTGAGGACTCGGCATAGAGCCAACGATGGTCGCGAAATCGACGCCATGGACGTCGATGGCAGCACCACACTCCTCTTCATCGCAGGACTCGACTTGGAGCCCTGCGTGAAGCTGCTGACGGAGGTTGGCGTGAATCTGAACCACCGCGACCGGAGCGGCAGCTTCGTGGTGCTACACATGGCGGCGGGGTACGTGAGGCCCGGTGTGGCAAAGGTTCTCCTAGATCTCGGCACAGATCTCGAGGTGGCGGGGTAA 558 0.5358 MKMHEEREAMAWRRGPVAFHPAAMADSNSGGHCKEVRACKLQGAQGGDFQSVVHKYYSYNSANYLSFELKILYLVARRREYLCLGGLLSSGMSIHQLHSSSLRTRHRANDGREIDAMDVDGSTTLLFIAGLDLEPCVKLLTEVGVNLNHRDRSGSFVVLHMAAGYVRPGVAKVLLDLGTDLEVAG 185
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma01g01445 185 SUPERFAMILY Ankyrin repeat 110 183 IPR036770 -
Gma01g01445 185 PANTHER SIGNAL RECOGNITION PARTICLE 43 KDA PROTEIN, CHLOROPLASTIC 106 184 IPR030300 GO:0009416|GO:0009507|GO:0045038|GO:0080085
Gma01g01445 185 PANTHER HOMEOBOX PROTEIN WARIAI 106 184 - -
Gma01g01445 185 Gene3D - 98 185 IPR036770 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma01g01445 Gma-Chr1 49350045 49367317 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma01g01445 53 180 CAMTA Transcription Factor Family AT5G09410 26.812 4.29e-06 44.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma01g01445 K12271 - gmx:100818382 119.012