Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma01g01440 ATGGGAGAGAAGGCTAATAGTGTTCAAGATTGTCTGAGTGATGATGGCTTTTTTAGCCAGAAGAATACTGTGCGTGTTTATAATAGGATGAATGATAACATTCTTGTGTATCTCCATTGTCAATCGAAGGACGATGATCTTGGCCAGCATGTTCTTGCCGTTGGAGAGCACCAAGAATGGTCCTTCAATGATAGGGTTATTGGCACAACTCTTTTTTGGTGCACGATGAATGCAAACAATGTGCATGTTTGA 252 0.4087 MGEKANSVQDCLSDDGFFSQKNTVRVYNRMNDNILVYLHCQSKDDDLGQHVLAVGEHQEWSFNDRVIGTTLFWCTMNANNVHV 83
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma01g01440 83 Pfam Plant self-incompatibility protein S1 23 80 IPR010264 -
Gma01g01440 83 PANTHER - 15 78 IPR010264 -
Gma01g01440 83 PANTHER PUMILIO HOMOLOG 15-LIKE 15 78 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma01g01440 Gma-Chr1 49246157 49246408 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma01g01440 16 74 Carbohydrate Esterase AT3G16970 38.983 2.09e-09 48.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma01g01440 - - gmx:106794334 122.094