Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma01g01394 ATGAAGGCCATGCCCTTGCCTTTTGAGGAATTTCAAGGGAAGGGAGTGTTGGATTTCTCTTCTGCCTCAGATTTATTTTCAGTGCTTTTGCATCATCCACAACCAAAGTGGACCACAGACAAAGCGGACTATTGCTATGTGGGCAGCAGCACTGAGCCCACCTCAGTTCTTGACTCCAGAAGAAGCCCTAGCCCTCCCACTTCCTCCTCCACAATGTCCTCTTCTCTTGGCAGCAGCAGCAACAACAGCACCAGCAAGGGTGGTGGTGGTAGTGGCACTTCAGCCAACACCACCACCAACCCAACACCACCCTCAGGCAACAACAACAACAACCCTCCTCAGGAATCCAGCCCTGAGAAATGTGGCATCAGGATGGAGGACTGGGAGGGTCAAGATCAATCCATTCTGAGGCTCATCATGGGGGATGTTGAAGACCCTTCTGCTGGATTGAGCAAGCTCCTTCAAAGCACTGCCTGTGGCTCTCAAAGTGTTGATTTCAATGCTGGCTTTGGTGTTGTTGATCAACAAGGGTTGAATATGAATATGAATATGGTGAGTAGTGGTAATATTGACCAAAATTACCCTGCTGGTTTCCCTTTCATTGCTGAGAATATTGATGGCCAGAATGCCAAGGCTGGTTCTGGGACTGGCCAGGTTTCAGAATCTGTTGTTTTCTCTGGCAACAATCCCCTCATGGTGTCAACATCTGTGTCCCCTGGTGTGTTCACTTCTCAGCAGCAGCAGGAGTTTGGAGTGGTGGATGAGAAGCCTCAGGTTATTAATCCACAGTTTATGTTGAACCAGAACCAAGTTCAGTTCTCAGAGAATCCTTCTTTCTTTGTGCCATTGATGTACCCCCAGGTGCAGGTGCAGGAGCAACAGGTTTTCTCTCCTCCGCATCAATCGAAACGCCCTCTCTTTGACACGATTGGTCACAATTTTCAGGCTCCAAGGTTGCCCCTTTTGGATTCAGGGCAAGAGGTGTTTGGTAGGAGGCAGCAAACACAGCTGCCATTGTTTCCTCACCATATGCAACAACAACAACAACAACAATCAATGGGTTTGCCATCTGCTAAACAGCAGAAGGTGAGTTCCACCGGAGACGATGCAAGCCACCAGTTTCAACAGGCTATATTTGATCAGTTGTACAAAACTGCTGAGCTCATAGAAGCTGGTAATCCGGTTCATGCGCAAGGGATATTGGCGCGGCTCAATCACCAGCTCTCCCCTATAGGTAAGCCTTTTCAGAGGGCTGCTTTCTACATGAAGGAGGCTTTGATGTCACTGCTTCATTCAAATGCTCACAGTTTCATGGCTTTTTCGCCAATTAGTTTCATATTCAAAATCGGAGCTTATAAGTCCTTTTCTGAGATATCACCTGTACTTCAGTTTGCCAATTTTACTTGCAACCAAGCCCTCATTGAAGCTGTGGAAAGGTTTGACCGAATTCATGTTATTGATTTTGATATTGGGTTTGGAGTACAGTGGTCATCTTTTATGCAAGAGCTTGCCTTGAGAAGTAGTGGGGCACCTTCACTCAAGGTCACTGCCATTGTGTCACCCTCCACTTGTGATGAGGTTGAGCTCAATTTCACTAGAGAGAATTTGATCCAATACGCCAAGGACATCAACGTGTCATTCGAGTTAAATGTTTTTAGTATTGAATCATTGAACTCTGCTTCATGTCCACTGCTTGGTCAATTCTTTGATAACGAGGCAATTGCTGTGAATATGCCGGTTTCAAGCTTCACAAACTATCCAGCGTTGTTCCCTTCTGTTCTTCATTTTGTGAAGCAGCTCAGGCCAAAGGTCGTGGTCACTTTGGACAGAATTTGTGATCGAATTGATGTACCACTTCCCACCAATGTAGTTCATGTTCTCCAATGTTATTCGGCCTTGCTCGAATCTCTGGATGCGGTGAATGTGAATCTTGATGCCCTCCAAAAGATTGAGAGGCATTTCATCCAACCAGCCATCAAGAAAATTATACTTGGCCACCACCATTCTCAAGAAAAATTACCCCCATGGAGGAACCTCTTCATACAATCTGGATTCTCTCCATTCACATTTAGCAACTTCACAGAAGCTCAAGCTGAGTGTCTAGTTCAGAGGGCACCTGTGAGGGGATTTCATGTGGAGAGAAAGCCTTCATCACTTGTTCTATGCTGGCAAAGGAAAGAACTCATCTCAGTTTCTACTTGGAGATGCTGA 2211 0.4604 MKAMPLPFEEFQGKGVLDFSSASDLFSVLLHHPQPKWTTDKADYCYVGSSTEPTSVLDSRRSPSPPTSSSTMSSSLGSSSNNSTSKGGGGSGTSANTTTNPTPPSGNNNNNPPQESSPEKCGIRMEDWEGQDQSILRLIMGDVEDPSAGLSKLLQSTACGSQSVDFNAGFGVVDQQGLNMNMNMVSSGNIDQNYPAGFPFIAENIDGQNAKAGSGTGQVSESVVFSGNNPLMVSTSVSPGVFTSQQQQEFGVVDEKPQVINPQFMLNQNQVQFSENPSFFVPLMYPQVQVQEQQVFSPPHQSKRPLFDTIGHNFQAPRLPLLDSGQEVFGRRQQTQLPLFPHHMQQQQQQQSMGLPSAKQQKVSSTGDDASHQFQQAIFDQLYKTAELIEAGNPVHAQGILARLNHQLSPIGKPFQRAAFYMKEALMSLLHSNAHSFMAFSPISFIFKIGAYKSFSEISPVLQFANFTCNQALIEAVERFDRIHVIDFDIGFGVQWSSFMQELALRSSGAPSLKVTAIVSPSTCDEVELNFTRENLIQYAKDINVSFELNVFSIESLNSASCPLLGQFFDNEAIAVNMPVSSFTNYPALFPSVLHFVKQLRPKVVVTLDRICDRIDVPLPTNVVHVLQCYSALLESLDAVNVNLDALQKIERHFIQPAIKKIILGHHHSQEKLPPWRNLFIQSGFSPFTFSNFTEAQAECLVQRAPVRGFHVERKPSSLVLCWQRKELISVSTWRC 736
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma01g01394 736 MobiDBLite consensus disorder prediction 342 367 - -
Gma01g01394 736 Pfam GRAS domain family 380 735 IPR005202 -
Gma01g01394 736 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 7 735 IPR005202 -
Gma01g01394 736 MobiDBLite consensus disorder prediction 50 121 - -
Gma01g01394 736 ProSiteProfiles GRAS family profile. 369 735 IPR005202 -
Gma01g01394 736 MobiDBLite consensus disorder prediction 50 117 - -
Gma01g01394 736 PANTHER GRAS FAMILY TRANSCRIPTION REGULATOR 7 735 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma01g01394 Gma-Chr1 48230696 48232906 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma01g01394 377 736 GRAS Transcription Factor Family AT4G00150 55.647 5.07e-130 395
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Gma01g01394 GRAS 9.4e-92 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma01g01394 - - gmx:100801785 1335.86
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma08g03155 08 48265440 48269494 Gma01g01394 01 48230696 48232906 PCT