Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma01g01393 ATGCAACCACAGGTTGTTCCATTTGCTAAACAACAGAAAGCAAGTTCCACTGGAGAAGATGCAAGCCACCAGCTCCATCATGCTATATATGACCAACTATACAAAACTGTTGAGCTGATAGAAGCTGGTAATCTGAATGTCTTGGCCTTCACACCTATTAGTTCAATATTCAAAATTGGAGCATATAAGTCCTTTTCTAAGATATCATATGTTGTTCAATTTGCCAACTTCACTAGTAATCAACCAGTCTTTGAAGCTATGGAAATGTTTGATCAAATTCACATTATCGATTTTGATATCGGGCTTGGGGTGCAATGGTATTCTCTTATGCAAGTGCTTGCCCTAAGGAGTAACGGTGTGCCTTCGCTCAAAGTCACTGCCATTGTATCACCCCTCACTTGTGATGAGTTTGAGATCAATATTGCTCAAGAAGAGTTGAACCAATCTACGAAAGACATCAACATGTCTTTTGAGCTCAATCTTAGGCCAAAAGTGGTGGTCACTCTAGATCAAAATTTTGACCAAATCGATGTACCATTTTCCTCCAATGTAGTCCATGCTCATCACTGTTACTCAACCTTGCTTGAATCACTTGATGTTGCGAATCTGAACCTAGATGTCCTCCAAAATATTGAGAACCATTTCATCCTTCCAACCATTAAGAAGATTATATTAAGTCCCCTCGGCTTGCAGGAAAAATTACCTACTTGGAGGAACATGTTTTTGCAATATGGCTTCTCTCCCTTCCCATTTAGTAACTTCACAGAAGCTCAAGCTGAGGGTTTAGTGGAGAAGGAACCTGTAAAGGGATTTCAATTGGAGAGAAAGCTCTCACCTCTTCTCTATGCTAGCAGAGGAAAGAACTCAACACAGTTTCAACTTAGAGATGCTGAGTAG 897 0.4013 MQPQVVPFAKQQKASSTGEDASHQLHHAIYDQLYKTVELIEAGNLNVLAFTPISSIFKIGAYKSFSKISYVVQFANFTSNQPVFEAMEMFDQIHIIDFDIGLGVQWYSLMQVLALRSNGVPSLKVTAIVSPLTCDEFEINIAQEELNQSTKDINMSFELNLRPKVVVTLDQNFDQIDVPFSSNVVHAHHCYSTLLESLDVANLNLDVLQNIENHFILPTIKKIILSPLGLQEKLPTWRNMFLQYGFSPFPFSNFTEAQAEGLVEKEPVKGFQLERKLSPLLYASRGKNSTQFQLRDAE 298
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma01g01393 298 Pfam GRAS domain family 14 160 IPR005202 -
Gma01g01393 298 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 161 278 IPR005202 -
Gma01g01393 298 ProSiteProfiles GRAS family profile. 1 296 IPR005202 -
Gma01g01393 298 PANTHER GRAS FAMILY TRANSCRIPTION REGULATOR 52 160 - -
Gma01g01393 298 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 52 160 IPR005202 -
Gma01g01393 298 PANTHER GRAS FAMILY TRANSCRIPTION REGULATOR 161 278 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma01g01393 Gma-Chr1 48148336 48149500 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma01g01393 50 281 GRAS Transcription Factor Family AT4G00150 41.304 9.36e-64 208
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Gma01g01393 GRAS 1.2e-28 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma01g01393 - - pvu:PHAVU_010G072700g 393.275
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma01g01393 01 48148336 48149500 Gma01g01393 01 48148336 48149500 ECH