Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Gma01g01368 | ATGAAGCAAGTGCAACTCATCCTACTCCTATCAGTGTCTCTTGTTCTTTTGGGTCCAATCCTAGTGATCTCAATAGACCTTTCTTCTTTCAACGATGATGTGTTGGGGTTGATTGTGTTCAAGGCTGGCCTAGAAGACCCAAAAGGAAAACTCTCTACGTGGAATGAAGATGATTATAGTCCTTGCAATTGGGTTGGTGTCAAATGTGACCTTGCAAACAATAGGGTATCTTCTCTTGTTCTTGATGGATTTTCTCTTTCTGGCCACATTGATAGGGGCCTTTTGAGACTGCAGTTTCTTCAGATTCTGTCTCTCTCAAGGAACAACTTCACAGGGACCATAGCTCCTGATCTTCTCAGCATTGGTGATTTACAAGTTGTTGATTTGAGTGAGAACAACCTCTATGGACCAATCCCTGATGGGATTTTCCAGCAATGTTGGTCTCTAAGAGTAGTTTCATTTGCCAACAACAACCTCACAGGTAAGATTCCTGATTCTTTGAGCTCATGCTATTCATTGGCAGTTGTGAACTTTTCCTCTAACCAGCTACATGGGGAATTGCCATCTGGAATGTGGTTTTTGAGGGGGCTACAGTCAATTGATCTTTCAAACAACTTTCTGGAGGGAGAGATTCCTGAAGGAATTCAGAATCTGATTGATTTGAGGGAGTTGAGGCTAGGGAGTAACCACTTCACTGGTAGGGTTCCTGAGCATATTGGAGACTGCTTGCTCTTGAAGTTGGTTGATTTCAGTGATAATTCTATTTCTGGGAGACTTCCTGAGTCAATGCAAAAACTCACCTCATGCACATTCCTTAGCTTGCAAGGAAATTCATTCACTGGTGGCATTCCACACTGGATTGGAGAAATGAAAAGTCTAGAGGTATTGGATCTTTCTGCAAACAGATTTTCTGGTTGGATTCCAAAGTCAATTGGAAATCTTGACTTGCTGAGTAGGTTGAATCTGTCAAGGAATCAGATCACGGGAAACCTGCCAGAGTTAATGGTAAACTGCATTAAGCTTTTGACTCTTGACATCAGCCACAATCACTTGGCAGGCCATCTTCCTTCATGGATATTCAGGATGGGCTTACAAAGTGTCTCTCTTTCAGGAAATAGGTTTAGTGAGAGCAATTATCCCTCACTTACTTCCATTCCTGTATCTTTTCATGGCCTCCAGGTTTTGGATTTGTCATCAAATGCATTTTTTGGCCAACTTCCATCTGGAATTGGAGGTCTTAGTAGCTTGCAAGTCTTGAATTTGTCCACCAATAATATCTCAGGGTCTATTCCTATGAGTATTGGAGAACTTAAATCATTGTACATTCTTGATTTGAGTGACAACAAGCTTAATGGAAGCATTCCTTCTGAAGTAGAAGGGGCAATTTCACTCAGTGAAATGAGGCTACAAAAGAACTTTTTAGGAGGGAGAATTCCAGCCCAAATTGAGAAGTGTTCAGAGCTAACATTTCTGAATCTTTCTCACAACAAGCTTATTGGTTCAATCCCTTCGGCCATTGCAAACCTAACCAATCTTCAGTATGCAGATTTCTCATGGAATGAACTCTCTGGAAGCTTACCAAAGGAGCTGACAAATCTTTCCAACCTTTTCTCATTTAATGTTTCATACAACCGCCTTCAAGGTGAGCTACCAGTGGGTGGTTTCTTCAATACAATCTCTCCTTTATCTGTCTCTGGTAATCCATTGTTATGTGGTTCAGTTGTTAATCACTCTTGCCCTTCTGTTCATCCAAAGCCTATTGTCCTAAACCCCAACTCTTCTTACTCCAACTCTGGCTCTTCCTTACAAAACAATCATCATAAGATGATGCTCAGCATCTCTGTCATTATTGCCATTGGTGCTGCTATTTTTATTGTCATTGGTGTGGTGGTTGTTACTGTCCTAAATATCCATGCAAGGTCTTCAATGTTATCTTCTGCTGCTCCATTTGTGTTCTCTGGTGGTGATGACTATAGCGGTTCACCCGCGAATGATCCAAACTATGGCAAGCTTGTGATGTTTTCCGGCGATGCTGAATTTGTTGATGGTGCTCATAATATTCTTAACAAAGACAGTGAAATAGGCCGTGGAGGATTTGGAGTTGTTTATTGCACTGTCCTTAGAGATGGTCATTGTGTTGCAATCAAGAAGCTTACAGTGTCCACTTTGACCAAGTCTCAAGAAGACTTTGAGAGGGAAGTTAAAATGCTTGGGAAGATCAAGCATCAAAATCTTGTGGCACTTGAAGGTTATTATTGGACTCCATCCTTGCAGCTCCTAATTTATGAGTACCTAGCCAGAGGGAGTTTGCAAAAGCTTCTACACGATGATGATAGCAGCAAAAATTTACTTTCTTGGAGACAAAGGTTCAAGATCATTCTTGGAATGGCAAAAGGGTTGGCCTATTTGCACCAAATGGAGTTAATTCACTATAATCTAAAATCAACCAATGTTTTCATAGATTGTTCTGATGAACCAAAGATAGGAGACTTTGGCTTGGTAAGGCTATTGCCAATGCTAGACCATTGTGTTTTGAGTAGCAAAATTCAAAGTGCACTTGGATACATGGCTCCTGAGTTCGCTTGCCGCACGGTCAAGATAACCGAGAAGTGTGACATTTATAGTTTTGGAATTTTGATTTTGGAGGTGGTGACAGGAAAAAGACCTGTGGAATACATGGAGGATGATGTGGTTGTTCTTTGTGACAAGGTGAGGAGTGCATTGGATGATGGCAAAGTGGAGCAATGTGTTGATGAGAAGCTTAAGGGTAATTTTGCTGCAGAGGAAGCAATTCCTGTGATAAAATTGGGGTTGGTTTGTGCATCACAAGTGCCCTCAAACCGTCCTGATATGGCTGAGGTAATCAACATATTAGAGCTGATCCAATGTCCTTCAGAGGAATTACAATGA | 2910 | 0.4127 | MKQVQLILLLSVSLVLLGPILVISIDLSSFNDDVLGLIVFKAGLEDPKGKLSTWNEDDYSPCNWVGVKCDLANNRVSSLVLDGFSLSGHIDRGLLRLQFLQILSLSRNNFTGTIAPDLLSIGDLQVVDLSENNLYGPIPDGIFQQCWSLRVVSFANNNLTGKIPDSLSSCYSLAVVNFSSNQLHGELPSGMWFLRGLQSIDLSNNFLEGEIPEGIQNLIDLRELRLGSNHFTGRVPEHIGDCLLLKLVDFSDNSISGRLPESMQKLTSCTFLSLQGNSFTGGIPHWIGEMKSLEVLDLSANRFSGWIPKSIGNLDLLSRLNLSRNQITGNLPELMVNCIKLLTLDISHNHLAGHLPSWIFRMGLQSVSLSGNRFSESNYPSLTSIPVSFHGLQVLDLSSNAFFGQLPSGIGGLSSLQVLNLSTNNISGSIPMSIGELKSLYILDLSDNKLNGSIPSEVEGAISLSEMRLQKNFLGGRIPAQIEKCSELTFLNLSHNKLIGSIPSAIANLTNLQYADFSWNELSGSLPKELTNLSNLFSFNVSYNRLQGELPVGGFFNTISPLSVSGNPLLCGSVVNHSCPSVHPKPIVLNPNSSYSNSGSSLQNNHHKMMLSISVIIAIGAAIFIVIGVVVVTVLNIHARSSMLSSAAPFVFSGGDDYSGSPANDPNYGKLVMFSGDAEFVDGAHNILNKDSEIGRGGFGVVYCTVLRDGHCVAIKKLTVSTLTKSQEDFEREVKMLGKIKHQNLVALEGYYWTPSLQLLIYEYLARGSLQKLLHDDDSSKNLLSWRQRFKIILGMAKGLAYLHQMELIHYNLKSTNVFIDCSDEPKIGDFGLVRLLPMLDHCVLSSKIQSALGYMAPEFACRTVKITEKCDIYSFGILILEVVTGKRPVEYMEDDVVVLCDKVRSALDDGKVEQCVDEKLKGNFAAEEAIPVIKLGLVCASQVPSNRPDMAEVINILELIQCPSEELQ | 969 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Gma01g01368 | 969 | Gene3D | Ribonuclease Inhibitor | 190 | 286 | IPR032675 | - | |
Gma01g01368 | 969 | Gene3D | Ribonuclease Inhibitor | 31 | 189 | IPR032675 | - | |
Gma01g01368 | 969 | SUPERFAMILY | L domain-like | 48 | 379 | - | - | |
Gma01g01368 | 969 | Gene3D | Phosphorylase Kinase; domain 1 | 667 | 764 | - | - | |
Gma01g01368 | 969 | ProSitePatterns | Protein kinases ATP-binding region signature. | 694 | 717 | IPR017441 | GO:0005524 | |
Gma01g01368 | 969 | Pfam | Protein kinase domain | 689 | 955 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Gma01g01368 | 969 | Gene3D | Transferase(Phosphotransferase) domain 1 | 765 | 964 | - | - | |
Gma01g01368 | 969 | Pfam | Leucine rich repeat N-terminal domain | 31 | 70 | IPR013210 | - | |
Gma01g01368 | 969 | CDD | STKc_IRAK | 694 | 961 | - | - | |
Gma01g01368 | 969 | SUPERFAMILY | L domain-like | 364 | 572 | - | - | |
Gma01g01368 | 969 | SMART | LRR_typ_2 | 314 | 338 | IPR003591 | - | |
Gma01g01368 | 969 | SMART | LRR_typ_2 | 339 | 362 | IPR003591 | - | |
Gma01g01368 | 969 | SMART | LRR_typ_2 | 290 | 313 | IPR003591 | - | |
Gma01g01368 | 969 | SMART | LRR_typ_2 | 389 | 413 | IPR003591 | - | |
Gma01g01368 | 969 | SMART | LRR_typ_2 | 121 | 145 | IPR003591 | - | |
Gma01g01368 | 969 | SMART | LRR_typ_2 | 194 | 217 | IPR003591 | - | |
Gma01g01368 | 969 | SMART | LRR_typ_2 | 218 | 242 | IPR003591 | - | |
Gma01g01368 | 969 | SMART | LRR_typ_2 | 533 | 557 | IPR003591 | - | |
Gma01g01368 | 969 | SMART | LRR_typ_2 | 437 | 461 | IPR003591 | - | |
Gma01g01368 | 969 | Pfam | Leucine Rich Repeat | 197 | 218 | IPR001611 | GO:0005515 | |
Gma01g01368 | 969 | PANTHER | LEUCINE-RICH RECEPTOR-LIKE KINASE FAMILY PROTEIN | 1 | 962 | - | - | |
Gma01g01368 | 969 | SMART | LRR_sd22_2 | 290 | 316 | - | - | |
Gma01g01368 | 969 | SMART | LRR_sd22_2 | 437 | 460 | - | - | |
Gma01g01368 | 969 | SMART | LRR_sd22_2 | 194 | 217 | - | - | |
Gma01g01368 | 969 | SMART | LRR_sd22_2 | 509 | 535 | - | - | |
Gma01g01368 | 969 | ProSiteProfiles | Protein kinase domain profile. | 688 | 961 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Gma01g01368 | 969 | SUPERFAMILY | Protein kinase-like (PK-like) | 689 | 962 | IPR011009 | - | |
Gma01g01368 | 969 | PANTHER | LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED | 1 | 962 | - | - | |
Gma01g01368 | 969 | Pfam | Leucine rich repeat | 391 | 450 | IPR001611 | GO:0005515 | |
Gma01g01368 | 969 | Pfam | Leucine rich repeat | 272 | 327 | IPR001611 | GO:0005515 | |
Gma01g01368 | 969 | Gene3D | Ribonuclease Inhibitor | 290 | 582 | IPR032675 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Gma01g01368 | Gma-Chr1 | 47506782 | 47509864 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Gma01g01368 | 30 | 965 | Receptor kinase-like Gene Family | AT3G56370 | 59.830 | 0.0 | 1094 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_LRR-VII-1 | Gma01g01368 | Pkinase | 1.4e-42 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Gma01g01368 | - | - | gmx:100791204 | 1837 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Gma01g01368 | 01 | 47506782 | 47509864 | Gma01g01368 | 01 | 47506782 | 47509864 | ECH | |
Gma09g02507 | 09 | 50378701 | 50382202 | Gma01g01368 | 01 | 47506782 | 47509864 | PCT | |
Gma01g01368 | 01 | 47506782 | 47509864 | Gma09g02507 | 09 | 50378701 | 50382202 | PCT |