Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma01g01363 ATGGAGCAGCGTTTATCTAGTCCTCAACCTTTACCTCTTCCATCACATCAGGGTGGTGGTGCATTGAAAGCTATTGACAGCTTTAAGTCGGGGATAGCTAGTGTATCTCTGTATGCTTCTGGACCAGCTCCTGATGTAGCAGAACAAGATGCTTTTTCCTCAGTTGAGTATGAGGAACTAGAAGGGTCGAAACACCGAGTTGGATTGATGAAGGAGCAATGTTCATCTATTCCGCAACCTTTGCATCTTCCGCCTACAGGGTTGATTAGAAACTTTACATATGAAGAAATTGCTGCTGCTTGCCACAACTTTTCTTCAGATCGATGCATGTCAGAACGTCTTTCTTCTACCATATATAGTGCTTCATTTGGTGATGATGCTTCAAGTGCGAAGAAGTTTGAAGCCACTGTCACCCGCCTTCATTCATCAACTCATGGATTGAAGGAATTCATAAATGAAGTTAATACCCTTGCATCTTTGCAACATCCACACCTCTGTAAATTGCTAGGATTTCATGCATGTGATGGTTCGGAACCAAGGATGTTGGTTTATGAGAGGCTATGCCATGGAAGCTTGGACCGCCAGTTGTTTGGGAGATCTGATGGTTCTTCAATTGATTGGAACTCGCGAATGAAAATTGTCATATGTGCTGCACAAAGCTTAATTTGGTGTAAAATTTATGTCAAATATTCAAAACTGAAGCAGCCTTCGGTGGCAATGTATAATGAATTTTCAGCAGCCAACATACAGATTGACGAAGATTTCAGTGCAAAGCTTTCTGGATATGGTTGTGTTGGACGTATTCCTGAGGAAGAGATTTCAAGCAGTTCATGTACTGTTGGAAACCTGTCAGTGGAGACATTGGAAAAAGGAATTCTTACTCCAAAAAGCAATGTATGGAGTTTTGGAATTGTTCTTTTGGAGCTACTTACTGGCAGAAAGAATCTTGATAGCCATCACCCCAAGGAAGAGAGGAACTTAGTCAAGTGGATCCTCAACTTAAAGGTCAATTTCCTCCCAAAGCGGCACAAGAACAGTGGCTGA 1044 0.4195 MEQRLSSPQPLPLPSHQGGGALKAIDSFKSGIASVSLYASGPAPDVAEQDAFSSVEYEELEGSKHRVGLMKEQCSSIPQPLHLPPTGLIRNFTYEEIAAACHNFSSDRCMSERLSSTIYSASFGDDASSAKKFEATVTRLHSSTHGLKEFINEVNTLASLQHPHLCKLLGFHACDGSEPRMLVYERLCHGSLDRQLFGRSDGSSIDWNSRMKIVICAAQSLIWCKIYVKYSKLKQPSVAMYNEFSAANIQIDEDFSAKLSGYGCVGRIPEEEISSSSCTVGNLSVETLEKGILTPKSNVWSFGIVLLELLTGRKNLDSHHPKEERNLVKWILNLKVNFLPKRHKNSG 347
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma01g01363 347 PANTHER OS01G0588500 PROTEIN-RELATED 2 331 - -
Gma01g01363 347 SMART tyrkin_6 112 342 IPR020635 GO:0004713|GO:0006468
Gma01g01363 347 Gene3D Phosphorylase Kinase; domain 1 72 185 - -
Gma01g01363 347 PANTHER RECEPTOR-LIKE KINASE PLANT-LIKE PROTEIN 2 331 - -
Gma01g01363 347 SUPERFAMILY Protein kinase-like (PK-like) 79 337 IPR011009 -
Gma01g01363 347 Gene3D Transferase(Phosphotransferase) domain 1 187 344 - -
Gma01g01363 347 ProSiteProfiles Protein kinase domain profile. 112 347 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma01g01363 347 Pfam Protein tyrosine and serine/threonine kinase 129 323 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma01g01363 Gma-Chr1 47407270 47409250 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma01g01363 90 330 Glycoside Hydrolase AT3G07070 34.959 1.76e-36 134
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-II Gma01g01363 PK_Tyr_Ser-Thr 9.8e-17 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma01g01363 - - aprc:113849641 478.018
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma01g01363 01 47407270 47409250 Gma01g01363 01 47407270 47409250 ECH
Gma09g02512 09 50409026 50411973 Gma01g01363 01 47407270 47409250 PCT
Gma01g01363 01 47407270 47409250 Gma09g02512 09 50409026 50411973 PCT