Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma01g01359 ATGGCTAGCCTCAAGGTTGCATTTTTGGCTGCAGTGCTCTGCATGGTTGTGGTGAGTGCACCCATGGCACATGCAGCTATCACGTGCGGGCAGGTGACGAGTAGCCTGGCCAATTGCATCGGTTACCTCCAGAAGGGAGGAACGCCGTCGTCGGGATGCTGCAACGGAGTGAAGAGCCTCAATGCCGCCGCCAAGACCACCGCCGACCGCCAGACGGCGTGCAACTGCCTCAAGTCGGCCGCCAGCCAAATCTCCGGCTTCAACGCCAACAACGCCGCCTCGCTCCCCGGCAAATGCGGAGTCTCCATCCCCTACAAGATCAGCACCTCCACCAACTGCGCTACCATCAAGGTTTGA 357 0.6022 MASLKVAFLAAVLCMVVVSAPMAHAAITCGQVTSSLANCIGYLQKGGTPSSGCCNGVKSLNAAAKTTADRQTACNCLKSAASQISGFNANNAASLPGKCGVSIPYKISTSTNCATIKV 118
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma01g01359 118 Pfam Protease inhibitor/seed storage/LTP family 29 113 IPR016140 -
Gma01g01359 118 PANTHER - 1 115 IPR000528 GO:0006869|GO:0008289
Gma01g01359 118 CDD nsLTP1 27 113 - -
Gma01g01359 118 PANTHER NON-SPECIFIC LIPID-TRANSFER PROTEIN 1 115 - -
Gma01g01359 118 ProSitePatterns Plant lipid transfer proteins signature. 95 116 IPR000528 GO:0006869|GO:0008289
Gma01g01359 118 Gene3D - 26 117 IPR036312 -
Gma01g01359 118 PRINTS Plant phospholipid transfer protein signature 28 44 IPR000528 GO:0006869|GO:0008289
Gma01g01359 118 PRINTS Plant phospholipid transfer protein signature 48 62 IPR000528 GO:0006869|GO:0008289
Gma01g01359 118 PRINTS Plant phospholipid transfer protein signature 69 84 IPR000528 GO:0006869|GO:0008289
Gma01g01359 118 PRINTS Plant phospholipid transfer protein signature 86 103 IPR000528 GO:0006869|GO:0008289
Gma01g01359 118 PRINTS Plant phospholipid transfer protein signature 104 115 IPR000528 GO:0006869|GO:0008289
Gma01g01359 118 SUPERFAMILY Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin 27 115 IPR036312 -
Gma01g01359 118 SMART aai_6 29 113 IPR016140 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma01g01359 Gma-Chr1 47334683 47336332 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma01g01359 8 117 Acyl Lipid Metabolism Gene Families AT5G59310 60.000 1.94e-36 118
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma01g01359 01 47334683 47336332 Gma01g01359 01 47334683 47336332 ECH
Gma03g00702 03 22503381 22505537 Gma01g01359 01 47334683 47336332 GST
Gma01g01359 01 47334683 47336332 Gma18g01882 18 51727250 51728251 PCT