Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma01g01350 ATGGGGAATCACAGGTTTAAGTTATCAGATATGATTCCAAATGCTTGGTTTTACAAGCTGAGGGACATGAGGGACATGGGTAGAGGAAGAGATTCAAGAAAGCATAGCACCACGCCCTCTAGGAAAAAGAAGCAAACTTCACCCCCTTCAACCACACATTCATCAAAACCAAACCAACCCCACCAACAATACAACAACAATATCCCTAGAAAGTCCTATTACTTCACAAGAGACCTCAAAACCTCACCCTCAAACACCCCAAAAATCATTTCTTCTCCTAGAAAATCAACCAAACTAAGAACCAAAAGAAGAACCCGGAGAACCCCAAAACTTGTCTCCTCAGGTTGTAGCTGCCGCACCACCCTTGAATCAGTGTGGACCAAATCAGATTCACATTCACCACAAGAACACTCTTCCTCATCCCCATTTGACACCTCTCCCGAGTCACAATCCCCAGAAATCAGAACAGACCGTATTCTTCTTCCATGTTCTTCATCATTCGATGAAATGGTGTCCTTGTCCACCACCTCTTGTGCCTCTTGCAGGCTTAACACAAACATAAACACCACCACCAACAACAACAACGACACCATCATAGACGTGGACAAAAACTTCATAGCAAGAAAAGATAACAAGCTTGATGGCTACTACAATTACAACACCAACAACAATGGCTATGATGACACCTTCTCAGAACTTGAGCTTCCTCCAATCATAACCAAGCCATCCAAGTTGCTAAAGAAGAGAGAACTCAAACAAGGGTCCTTGAAGGTGAGAATTGTGAAGGAACAAGACTCTGAAATGAAGGAACAGAGGAATAGTGGTTCTTTGAAGAGGCTATCTCTGAGTTCTCCCGGGGGGAGGTTGAGGATCCACTCGCCGAGAATTGCTGGCCGGAGGGGCCGGAAAAGCGTGTCGTCGACAGCGAGTTCTGGCTCCCGGAGAAGCCTCTCCGATAGCTTTGCGGTTGTGAAGTCATCCTTTAACCCACAGAAGGATTTCATGGAGTCCATGATGGAGATGATTGTGGAGAACAACATAAGGGCATCCAAGGACTTGGAAGATCTACTTGCTTGCTACCTTTCTCTTAATTCAGATGAGTATCATGACCTCATCATCAAGGTGTTCAAGCAAATTTGGTTTGATTTGACTCAACCAAGGTAG 1164 0.4485 MGNHRFKLSDMIPNAWFYKLRDMRDMGRGRDSRKHSTTPSRKKKQTSPPSTTHSSKPNQPHQQYNNNIPRKSYYFTRDLKTSPSNTPKIISSPRKSTKLRTKRRTRRTPKLVSSGCSCRTTLESVWTKSDSHSPQEHSSSSPFDTSPESQSPEIRTDRILLPCSSSFDEMVSLSTTSCASCRLNTNINTTTNNNNDTIIDVDKNFIARKDNKLDGYYNYNTNNNGYDDTFSELELPPIITKPSKLLKKRELKQGSLKVRIVKEQDSEMKEQRNSGSLKRLSLSSPGGRLRIHSPRIAGRRGRKSVSSTASSGSRRSLSDSFAVVKSSFNPQKDFMESMMEMIVENNIRASKDLEDLLACYLSLNSDEYHDLIIKVFKQIWFDLTQPR 387
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma01g01350 387 Pfam DNA-binding domain 1 48 IPR025830 GO:0003677
Gma01g01350 387 PANTHER TRANSCRIPTION REPRESSOR OFP1-LIKE 3 385 - -
Gma01g01350 387 TIGRFAM A_thal_3678: uncharacterized plant-specific domain TIGR01568 321 384 IPR006458 -
Gma01g01350 387 Pfam Transcriptional repressor, ovate 327 383 IPR006458 -
Gma01g01350 387 ProSiteProfiles OVATE domain profile. 323 382 IPR006458 -
Gma01g01350 387 MobiDBLite consensus disorder prediction 127 153 - -
Gma01g01350 387 MobiDBLite consensus disorder prediction 80 94 - -
Gma01g01350 387 MobiDBLite consensus disorder prediction 42 68 - -
Gma01g01350 387 MobiDBLite consensus disorder prediction 95 109 - -
Gma01g01350 387 PANTHER TRANSCRIPTION REPRESSOR OFP7-RELATED 3 385 IPR038933 GO:0045892
Gma01g01350 387 MobiDBLite consensus disorder prediction 27 68 - -
Gma01g01350 387 MobiDBLite consensus disorder prediction 264 312 - -
Gma01g01350 387 MobiDBLite consensus disorder prediction 80 115 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma01g01350 Gma-Chr1 47029265 47030981 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF OFP Gma01g01350 Ovate 1.6e-22 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma01g01350 - - gmx:100785362 646.736
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma01g01350 01 47029265 47030981 Gma01g01350 01 47029265 47030981 ECH