Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma01g01342 ATGCGGGGAGGGAGAGAGAGGGGGGGAAGGACCTTAGAGGGGGAAGCAAAAAGGACAAAAAAAGGGATTGGGGTCGCTGAGACAGAGAGAAGCAATGGAGACATCGACTGTTTGAGTCCTAGATGTAGAGGCGCGAGGCTTCGCCCTAGGCAAGGAGGTTCCGGGAAGCGACGGTGGTGGTGGCACCACCTAAAGATCATGGCCTCATCTAGCTACTCTAACTCTCCTTGTGATGCCTGCAAGTTCTTAAGAAGAAAATGCATGCTGGATTGCATTTTCTCCCCATATTTCCCTCCAAAAGAGCCTCAGAAGTTCGCCAATATGCACAAGATATTTGGAGCAAGCAACGTGAGCAAGCTTCAAAATGAGGTGCAGCCCTACCAGAGGGAGGATGCAGTGAACTCACTGGCCTATGAAGCCGAGGCATGGATAGAGGATCCGGTTTATGGTTGTGTTGGGGCAATCTCAGTGCTATTAAAAGTGCAAATATTGCACCAACACAGGGAAAGAACCTTTGTCCAAATGTAA 528 0.4962 MRGGRERGGRTLEGEAKRTKKGIGVAETERSNGDIDCLSPRCRGARLRPRQGGSGKRRWWWHHLKIMASSSYSNSPCDACKFLRRKCMLDCIFSPYFPPKEPQKFANMHKIFGASNVSKLQNEVQPYQREDAVNSLAYEAEAWIEDPVYGCVGAISVLLKVQILHQHRERTFVQM 175
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma01g01342 175 PANTHER LOB DOMAIN-CONTAINING PROTEIN 25 67 167 - -
Gma01g01342 175 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 67 167 - -
Gma01g01342 175 Pfam Lateral organ boundaries (LOB) domain 76 160 IPR004883 -
Gma01g01342 175 ProSiteProfiles LOB domain profile. 75 175 IPR004883 -
Gma01g01342 175 MobiDBLite consensus disorder prediction 1 26 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma01g01342 Gma-Chr1 46850964 46852382 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma01g01342 63 169 AS2 family AT3G27650 71.963 1.80e-53 166
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Gma01g01342 LOB 5.3e-35 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma01g01342 - - gmx:100782694 219.935