Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma01g01287 ATGGGACACAACAACACTTGTCATCATCATGTCAAAGGTTTCCACACAGACCCTTTTCAGCATAGCCTCTCTTTTGCTTCAAATGGTGGTGGTGATAGGAGGAGGAAATGCCGGAGCAATGAAAAAAGTGGTAGCGGTGGTTTCATTTGCTTACCCTTTTTTCTGTTTCTTTTGGCTTCCACTTCCACCATTCAGCATGTTTCAGGCCACTTGTGGGATGGGGTGGTTGTGACTCAGGCTGATTTTCAAGCCCTTAGGGTTATTAAGAATGAGCTTATTGACTTCAAAGGGGTGCTGAAAAGCTGGAATGACAGTGGTGTAGGTGCTTGTTCAGGAGGCTGGGCTGGAATCAAGTGTGTGAATGGTGAGGTTATTGCAATTCAGCTTCCTTGGAGAGGGTTAGGTGGGAGAATTTCAGAGAAAATTAGCCAACTTCAGTCTCTTAGGAAGCTCAGTCTCCATGACAATGCTCTTGGTGGTCCAGTTCCTTTGACACTTGGTTTGCTTCCTAACCTTAGAGGAGTTTATCTCTTCAACAACAAGCTTTCAGGTTCTATCCCTCCTTCCCTTGGAAACTGTCCAATGCTTCAGTCTCTTGATATTAGCAACAATTCCCTCAGTGGTAAAATCCCTTCTAGTTTAGCAAGATCCACTAGGATATTCAGGATCAATTTGAGCTTCAACTCACTTTCTGGATCCATTCCTAGTAGTCTCACTATGTCTCCTTCTCTAACCATTCTTGCACTTCAGCACAACAATCTCTCCGGTTCTATCCCAGATTCTTGGGGTGGAACTGGAAAGAAGAAAGCCTCTCAGCTTCAAGTTTTGACCCTTGATCACAATCTTTTTTCTGGAACTATCCCAGTTTCTCTAGGGAAGCTAGCTTTTCTTGAAAATGTTTCCTTGAGTCATAACAAAATTGTAGGGGCTATTCCAAGTGAGCTAGGTGCACTTTCCAGGCTTCAAATTCTTGATCTATCAAACAATGTCATCAATGGCAGCCTTCCTGCTAGCTTCTCTAACCTCTCTTCTCTTGTTTCATTGAATCTAGAGAGCAATCAACTTGCAAGCCATATTCCCGATTCTTTGGACAGGTTGCACAACCTTTCTGTGCTTAACCTGAAGAACAATAAGCTTGATGGCCAAATCCCAACAACAATTGGGAACATTTCAAGCATTAGCCAAATTGATTTATCTGAGAACAAATTAGTTGGAGAAATCCCAGATTCCCTTACCAAACTTACAAATCTCAGTTCATTCAATGTCTCCTACAACAACCTATCTGGTGCTGTTCCATCTCTACTTTCCAAAAGGTTCAATGCTAGCTCATTTGTTGGGAATCTTGAGCTATGTGGATTCATCACTTCAAAACCATGCTCTTCACCCCCTCCTCATAACCTTCCAACTCAATCACCACATGCTCCTTCCAAGCCGCATCACCACAAACTAAGCACCAAGGACATAATCCTCATAGTGGCAGGTATTCTCCTGTTGGTTCTGTTAGTACTGTGCTGCTTCTTGCTGTGTTGTTTGATCAGGAGAAGAGCTGCTTCAAGCAGAAAGAGTAGCAAGACTGCTAAGGCTGCAGCATCTGCCAGGGGTGTTGAGAAAGGTGCCTCAGCTGGCGAAGTTGAATCAGGAGGTGAAGCTGGTGGGAAACTAGTTCACTTTGATGGGCCTTTTGTGTTTACTGCTGATGATCTTTTGTGTGCAACTGCGGAGATAATGGGAAAAAGTGCATTTGGGACAGCATACAAAGCGACACTGGAAGATGGTAACCAAGTTGCTGTGAAGAGGTTGAGGGAAAAGACTACTAAAGGGCAGAAGGAGTTTGAAACTGAGGTTGCTGCACTTGGCAAAATCAGACACCCAAATCTCTTGGCACTTAGAGCCTACTATTTAGGACCAAAAGGAGAGAAGCTTCTTGTGTTTGATTACATGACCAAAGGAAGCCTAGCATCATTCCTTCATGCTCGCGGGCCTGAAATTGTTATTGAATGGCCAACAAGGATGAAGATAGCCATCGGAGTTACTCGCGGCTTGAGCTACCTCCACAACCAAGAGAACATTGTACACGGGAACCTTACATCAAGCAACATACTATTGGATGAGCAAACAGAAGCCCACATAACAGACTTTGGCCTCTCAAGGCTGATGACAACTTCTGCCAACACCAACATCATCGCTACTGCAGGAAGTCTCGGCTACAATGCACCAGAGCTTTCAAAGACCAAGAAGCCTTCCACAAAGACTGATGTGTACAGCCTCGGTGTCATCATGTTGGAGCTCTTGACCGGTAAACCGCCTGGGGAGCCAACCAATGGCATGGACTTGCCACAATGGGTGGCATCCATAGTTAAGGAAGAGTGGACTAATGAAGTGTTTGATTTGGAGCTCATGAGGGATGCACCAGCCATAGGGGATGAATTGCTTAACACATTGAAGTTAGCATTGCATTGTGTGGATCCTTCTCCAGCTGCTAGGCCTGAAGTTCAGCAAGTTCTGCAGCAATTGGAGGAGATTAAACCAGACTTAGCTGCAGGGGATGATGATGGAGCTAAGGCTTACTTTTTAATCATTACTTTAGATAGCATGAATATGTTTTGTTCTGTTGTTTACGATTTTGGCGCGAGGTTGTGGTTTCCAGTTCGTGATTTCCGTTCTTCTGTGGTTGAAGGTCTATGTAATTTTATGGCAAGGATTCCTGACAAGATTAGGTCTATTGATGGATCAAAAGAAACGTTTAAGCTTGCTGTTAGGATCACCGATCTTTGGTTCGTTGGGACTCCTAACAAGTTTGAGCAAGCGGAAATGGTTTTTGTTGATTCTGAGGGTGATCAAATTCATGCTATTTGTAAATCGGACCACCTCAAGTCTTGGAAAGCTTATTTGAAAGAGAATTGCACTTATGTTATGCATAATTTCAAAGTTGTTAAGAATGATGGTCAATTTAGAGTGTGCGAACATGAGTACAAGTTATTTTTTATTGGAGTGACGGTTGTTAGAGAAGCTGATTTGCATGAACTGCCTTTTAAGGAATTTAGATTTGTTGAATTTGCAAATGTTGTTGCTGGCAATTTTGTGTCTGGCCTGTTGGTTAGAGAGTATAATATTATTGGGGTCATTGATCAGGTGGTCTTTCGGCATGTTTCATCGAAAAATACCAGGGTTGTTTTTAGAATGAAGGATTTGAGCAGTGAAATTTTGTCTTGCACACTTTGGGAGAATTACTGTACTCAGTTCCTATCCTATTTGAATGAACGTGGGCATGATGGGCCGATGGTTGTTATATTGATGCATGCCAGAATAAAATATGCACAGGGTAATTTTCCAGCTTCAGTGAGCAATTCCTTCAAGGCGTCAAAACTATTGATTAATGATCCTATATTAGAAATTCAGGAATTTAAAGAGAGGCTTTTAGATTTAGGTGTTGATGTGAGTCGAGTTTTGCTACCTGGCGATCAAGCAAGCTCACAAGTTTCAGGGGGAAGTCAGCTATCATCAAAGGATTCGTTTCTTTCAAAGGCTGAAGCCAAAACTATTTTAGAAATCAATGCCATTTCTGAGgacgttgtttgtgttaccgtggggactattagcaaaatagtcatggataaccattcatggtgttatccagcctgtgctcaatgtcataggaaaactgacatCCAAACAGGACCATTCACATGTGGATGTGGCAAGGATAATGATCAGCCTGTTCTAAGGTATAGACTTAAGGTCATGGTTACACAAAACAATGAGAGTGGCAAATTTTTGCTCTGGGACCATGAATGTGCTGAATTGATTGGCCAAACAACTGATGGTGTAAATAGGGTCAAGATTGAAGTATGTTCTTCGAGTTCACTTGACAAATTGTTGGGTCATGTGCTTGCTTTTAAGGTCAGGATTCAATCAAGATTAAAAAATGTTGTTGTACTTAAATACTCAAAAGACCTGGATTTGATCAATGTTGTTCTGGAGATGCTGCCTGATAGTGAGCAATTTCTATCTGCCACAGCTGACCATGATCCGGTTGCGGGGTTGCCTTTAACGCCCAAAAAGCGGATGTCATCTGATGAAGCCGATGATGAGTTAGGGAGCTCTCATATTTCGTCAGCCCAGCTATCGTCTAACAAATTAACAAGACATTCTCATAGGAGCTAA 4164 0.4152 MGHNNTCHHHVKGFHTDPFQHSLSFASNGGGDRRRKCRSNEKSGSGGFICLPFFLFLLASTSTIQHVSGHLWDGVVVTQADFQALRVIKNELIDFKGVLKSWNDSGVGACSGGWAGIKCVNGEVIAIQLPWRGLGGRISEKISQLQSLRKLSLHDNALGGPVPLTLGLLPNLRGVYLFNNKLSGSIPPSLGNCPMLQSLDISNNSLSGKIPSSLARSTRIFRINLSFNSLSGSIPSSLTMSPSLTILALQHNNLSGSIPDSWGGTGKKKASQLQVLTLDHNLFSGTIPVSLGKLAFLENVSLSHNKIVGAIPSELGALSRLQILDLSNNVINGSLPASFSNLSSLVSLNLESNQLASHIPDSLDRLHNLSVLNLKNNKLDGQIPTTIGNISSISQIDLSENKLVGEIPDSLTKLTNLSSFNVSYNNLSGAVPSLLSKRFNASSFVGNLELCGFITSKPCSSPPPHNLPTQSPHAPSKPHHHKLSTKDIILIVAGILLLVLLVLCCFLLCCLIRRRAASSRKSSKTAKAAASARGVEKGASAGEVESGGEAGGKLVHFDGPFVFTADDLLCATAEIMGKSAFGTAYKATLEDGNQVAVKRLREKTTKGQKEFETEVAALGKIRHPNLLALRAYYLGPKGEKLLVFDYMTKGSLASFLHARGPEIVIEWPTRMKIAIGVTRGLSYLHNQENIVHGNLTSSNILLDEQTEAHITDFGLSRLMTTSANTNIIATAGSLGYNAPELSKTKKPSTKTDVYSLGVIMLELLTGKPPGEPTNGMDLPQWVASIVKEEWTNEVFDLELMRDAPAIGDELLNTLKLALHCVDPSPAARPEVQQVLQQLEEIKPDLAAGDDDGAKAYFLIITLDSMNMFCSVVYDFGARLWFPVRDFRSSVVEGLCNFMARIPDKIRSIDGSKETFKLAVRITDLWFVGTPNKFEQAEMVFVDSEGDQIHAICKSDHLKSWKAYLKENCTYVMHNFKVVKNDGQFRVCEHEYKLFFIGVTVVREADLHELPFKEFRFVEFANVVAGNFVSGLLVREYNIIGVIDQVVFRHVSSKNTRVVFRMKDLSSEILSCTLWENYCTQFLSYLNERGHDGPMVVILMHARIKYAQGNFPASVSNSFKASKLLINDPILEIQEFKERLLDLGVDVSRVLLPGDQASSQVSGGSQLSSKDSFLSKAEAKTILEINAISEDVVCVTVGTISKIVMDNHSWCYPACAQCHRKTDIQTGPFTCGCGKDNDQPVLRYRLKVMVTQNNESGKFLLWDHECAELIGQTTDGVNRVKIEVCSSSSLDKLLGHVLAFKVRIQSRLKNVVVLKYSKDLDLINVVLEMLPDSEQFLSATADHDPVAGLPLTPKKRMSSDEADDELGSSHISSAQLSSNKLTRHSHRS 1387
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma01g01287 1387 SUPERFAMILY Nucleic acid-binding proteins 905 1003 IPR012340 -
Gma01g01287 1387 MobiDBLite consensus disorder prediction 1345 1387 - -
Gma01g01287 1387 ProSiteProfiles Protein kinase domain profile. 570 845 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma01g01287 1387 Gene3D - 903 1003 IPR012340 -
Gma01g01287 1387 Gene3D Ribonuclease Inhibitor 77 217 IPR032675 -
Gma01g01287 1387 SUPERFAMILY L domain-like 118 461 - -
Gma01g01287 1387 SUPERFAMILY Nucleic acid-binding proteins 1036 1139 IPR012340 -
Gma01g01287 1387 SUPERFAMILY Nucleic acid-binding proteins 1179 1303 IPR012340 -
Gma01g01287 1387 CDD RPA1_DBD_C 1175 1274 IPR013955 -
Gma01g01287 1387 Gene3D Transferase(Phosphotransferase) domain 1 648 854 - -
Gma01g01287 1387 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE IMK3-RELATED 17 847 - -
Gma01g01287 1387 CDD RPA1_DBD_A_like 916 1001 - -
Gma01g01287 1387 SUPERFAMILY Protein kinase-like (PK-like) 574 843 IPR011009 -
Gma01g01287 1387 Pfam Domain of unknown function DUF223 937 1024 IPR003871 -
Gma01g01287 1387 SMART LRR_typ_2 414 437 IPR003591 -
Gma01g01287 1387 SMART LRR_typ_2 145 168 IPR003591 -
Gma01g01287 1387 SMART LRR_typ_2 318 341 IPR003591 -
Gma01g01287 1387 SMART LRR_typ_2 342 365 IPR003591 -
Gma01g01287 1387 SMART LRR_typ_2 366 390 IPR003591 -
Gma01g01287 1387 SMART LRR_typ_2 169 193 IPR003591 -
Gma01g01287 1387 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE IMK3-RELATED 17 847 - -
Gma01g01287 1387 CDD RPA1_DBD_B_like 1037 1139 - -
Gma01g01287 1387 Gene3D Ribonuclease Inhibitor 335 460 IPR032675 -
Gma01g01287 1387 Gene3D Ribonuclease Inhibitor 218 334 IPR032675 -
Gma01g01287 1387 Pfam Leucine rich repeat 297 355 IPR001611 GO:0005515
Gma01g01287 1387 Gene3D - 1008 1144 IPR012340 -
Gma01g01287 1387 Pfam Replication factor-A C terminal domain 1197 1281 IPR013955 -
Gma01g01287 1387 CDD STKc_IRAK 576 841 - -
Gma01g01287 1387 Pfam Leucine rich repeat N-terminal domain 80 119 IPR013210 -
Gma01g01287 1387 Gene3D Phosphorylase Kinase; domain 1 576 647 - -
Gma01g01287 1387 Gene3D - 1159 1321 IPR012340 -
Gma01g01287 1387 Pfam Protein tyrosine and serine/threonine kinase 573 838 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma01g01287 Gma-Chr1 45588096 45598571 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma01g01287 70 843 Receptor kinase-like Gene Family AT3G51740 69.112 0.0 1039
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Gma01g01287 PK_Tyr_Ser-Thr 9.2e-42 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma01g01287 - - gmx:100799290 1540.4
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma01g01287 01 45588096 45598571 Gma01g01287 01 45588096 45598571 ECH