Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma01g01282 ATGACACTTTCTTCGTTCCTGTGTCTTGTTTTCATATTTCAATTTCTCTTCACATCACCCTCACTCTCTTTGTCGTCGGATGGGCTCGCCCTTCTCGCGCTAAAGTCTGCGGTGGACGAGCCCTCCGCTGCGGCGTTCTCCGACTGGAACAACGGCGACCCCACGCCGTGCGGCTGGTCAGGGATCGCCTGCACCAACATCTCCGGCGAGGCGGAGCCGCGCGTGGTCGGAATCTCCCTCGCCGGAAAATCGCTCTCCGGCTACCTCCCCTCGGAGCTCGCTCTCCAACGCCACTGCGCTCCACAGCCTCTTCCTCCACGGCAACAACCTCTCCGGCGCCATCCCCTCCTCCCTCTGCACCCTCCCCCGCCTCCAGAACCTCGACCTCTCCAAAAAGCCTTCTCCGGCCACATCCCGGAGCACCTCAAAAACTGCAAGAACCTCCAGCGCCTCGTCCTCGCCGGCAACAAATTCTCCGGCGAGATTCCCGCTGGCGTGTGGCCGGACCTCCGTAATCTACTCCAACTCGACCTTTCCGACAACGAGTTAACAGGCTCAATCCCCGGCGAAATCGGAACCCTAATTTCCCTCTCCGGTACGCTGAACCTCTCCTTCAACCACCTCTCCGGTAAAATTCCAGCTTCGTTAGGAAAATTACCGGCAACAGTGAGCTATGACCTCAAAAACAACAACCTCAGCGGCGAAATTCCCCAAACGGGATCGTTTTCGAACCAGGGCCCCACTGCGTTCCTCGGAAACCCGGACTTATGCGGGTTTCCGCTCAGGAAATCGTGTTCTGGTCTGGACCGGAATTTTTCTCCCGGTTCGGATCAGAACAAACCGGGTAATGGTAACCGGTCCAAGGGGCTGAGCCCCGGTTTAATTATTTTAATTTCGGCGGCTGATGCTGCTGTAGTGGCCTTCATTGGGCTTGTGATTGTGTACATTTATTGGAAGAGAAAGGATGATGAGAATGCTTGTAGTTGCATTAGGAAGAGGAGTTTTGGTGAAGAGAAAGGGAACATGTGTGTGTGTGGTGGATTATCATGTGTTGGTGGGGTGAAGAGTGATGATGATGAAGAGGAAGAGTATGAGGGGGGTGAGGGTGAGGGTGAAGGGGAATTGGTGAGGATTGACAAGGGTTTAAGTTTTGAGCTTGATGAGTTGTTAAGGGCTTCAGCTTATGTGTTGGGGAAGAGTGGGTTAGGGATTGTGTATAAGGTGGTGTTGGGGAATGGGGTGCCTGTGGCTGTGAGGAGGTTGGGGGAGGGTGGTGAACAGAGGTATAAGGAGTTTGCTGCTGAGGTTATGGCCATTGGGAAGGTCAAGCACCCTAATGTTGTGAGGTTGAGGGCTTACTATTGGGCACATGATGAGAAGCTTCTCATCAGTGATTTCATCTCCAATGGCAATTTGACTCATGCCCTTAGAGGGAGACATGGCCAACCATCTACAAATCTTTCATGGTCCACCAGGCTGAGAATCACCAAAGGAACAGCGAGGGGCCTGGCCTATCTCCACGAATGCAGTCCAAGAAAATTCGTCCATGGCGATATCAAGCCCTCCAACATTCTTCTTGACAACGACTTCCAGCCCTACATATCCGATTTTGGCCTTAACCGTCTAATCAGCATCACTGGCAACAACCCTTCCACCGGTGGATTCATGGGTGGAGCTCTTCCTTACATGAACTCATCACAGAAAGAGAGAACTAACAGTTACAAAGCCCCCGAGGCTCGTGTCCCTGGCTGCAGACCCACCCAGAAATGGGACGTGTACTCGTTCGGGGTCGTGCTACTAGAAATACTAACTGGGAGGTCACCAGAGTCATCTCCCACCACATCAACTTCCATGGAAGTCCCTGACTTAGTGAAGTGGGTGAGGAAAGGATTCGATCAAGAAAGCCCGTTATCTGAAATGGTTGATCCATCGCTGCTCCAAGAAGTGCGTGTTAAGAAAGAGGTGCTGGCTGTGTTTCATGTAGCACTGTCTTGTACTGAGGGAGACCCCGAGGCTAGGCCTAGGATGAAAACTGTCTCTGAAAATCTTGATAAGATTGGAACGTAA 2067 0.5249 MTLSSFLCLVFIFQFLFTSPSLSLSSDGLALLALKSAVDEPSAAAFSDWNNGDPTPCGWSGIACTNISGEAEPRVVGISLAGKSLSGYLPSELALQRHCAPQPLPPRQQPLRRHPLLPLHPPPPPEPRPLQKAFSGHIPEHLKNCKNLQRLVLAGNKFSGEIPAGVWPDLRNLLQLDLSDNELTGSIPGEIGTLISLSGTLNLSFNHLSGKIPASLGKLPATVSYDLKNNNLSGEIPQTGSFSNQGPTAFLGNPDLCGFPLRKSCSGLDRNFSPGSDQNKPGNGNRSKGLSPGLIILISAADAAVVAFIGLVIVYIYWKRKDDENACSCIRKRSFGEEKGNMCVCGGLSCVGGVKSDDDEEEEYEGGEGEGEGELVRIDKGLSFELDELLRASAYVLGKSGLGIVYKVVLGNGVPVAVRRLGEGGEQRYKEFAAEVMAIGKVKHPNVVRLRAYYWAHDEKLLISDFISNGNLTHALRGRHGQPSTNLSWSTRLRITKGTARGLAYLHECSPRKFVHGDIKPSNILLDNDFQPYISDFGLNRLISITGNNPSTGGFMGGALPYMNSSQKERTNSYKAPEARVPGCRPTQKWDVYSFGVVLLEILTGRSPESSPTTSTSMEVPDLVKWVRKGFDQESPLSEMVDPSLLQEVRVKKEVLAVFHVALSCTEGDPEARPRMKTVSENLDKIGT 688
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma01g01282 688 Pfam Protein kinase domain 396 622 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma01g01282 688 SUPERFAMILY L domain-like 25 262 - -
Gma01g01282 688 SUPERFAMILY Protein kinase-like (PK-like) 396 682 IPR011009 -
Gma01g01282 688 Pfam Leucine rich repeat N-terminal domain 25 64 IPR013210 -
Gma01g01282 688 SMART serkin_6 395 686 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma01g01282 688 Gene3D Ribonuclease Inhibitor 23 100 IPR032675 -
Gma01g01282 688 CDD STKc_IRAK 397 686 - -
Gma01g01282 688 MobiDBLite consensus disorder prediction 103 130 - -
Gma01g01282 688 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 168 688 - -
Gma01g01282 688 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 9 94 - -
Gma01g01282 688 Gene3D Phosphorylase Kinase; domain 1 383 466 - -
Gma01g01282 688 ProSitePatterns Serine/Threonine protein kinases active-site signature. 514 526 IPR008271 GO:0004672|GO:0006468
Gma01g01282 688 Gene3D Transferase(Phosphotransferase) domain 1 467 688 - -
Gma01g01282 688 ProSiteProfiles Protein kinase domain profile. 391 686 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma01g01282 688 MobiDBLite consensus disorder prediction 100 130 - -
Gma01g01282 688 Gene3D Ribonuclease Inhibitor 131 271 IPR032675 -
Gma01g01282 688 PANTHER RECEPTOR PROTEIN KINASE-LIKE PROTEIN ZAR1 168 688 - -
Gma01g01282 688 PANTHER RECEPTOR PROTEIN KINASE-LIKE PROTEIN ZAR1 9 94 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma01g01282 Gma-Chr1 45352673 45357788 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma01g01282 18 686 Receptor kinase-like Gene Family AT1G67510 64.124 0.0 857
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Gma01g01282 Pkinase 1.3e-31 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma01g01282 - - gmx:100793996 1214.52
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma18g01903 18 52019126 52023386 Gma01g01282 01 45352673 45357788 PCT
Gma07g01449 07 19561613 19566425 Gma01g01282 01 45352673 45357788 PCT