Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma01g01259 ATGGAAGAAAGACATGGCTCACAATGTTCAAAGACAAATCCTTCTAACATTGATGAAGATGAGGAGTGTGAAAGTGAGGCCAATGAAGAGCAAAGTACGCAAAAAAACAATGGAGGAAGCTCAAGTAACAGCACAGTGGAAGAGAATGAGAAAAAGATAAGGCCTTATGTTAGATCCAAGATGCCAAGGCTTCGGTGGACACCTGATCTTCATCTTCGCTTTGTTCATGCGGTTCAACGACTTGGAGGACAAGAGAGAGCAACACCAAAGTTGGTTCTTCAATTGATGAACGTCAAAGGTTTGAGTATTGCCCATGTCAAGAGTCATTTACAGATGTTTAGGAGCAAAAAGGTGGATGACCGAAATCAAGTATTTGCTGATTACAATAATCTTGTTGAAATTGGAGACAAAAATATTTATAATATTAGCCAACTTTCAATGCTTCAAGGGTATAATCCGAGTCAAAGTTCATCCTTCAGCTACACAAATAATTATCCATGTTATGGACTCGGGGATGCTTCTTTTGGTGTCTACGAAAAACTGTTACAAAGACCTTTCGATTGGTCTAATGCAATTTCTCGGGAAGGTTCATCCATTTTTGGGGAACAAAGCAAAATCCGTGAACCAAAAGATGAGTTTCTCTCATTTGGTGCTCATGACTCTCTAAGCGCACGCGCACGATTAAGCCACGTTGATCACATACCACCAATCAATATTTTGCAACAAAGAGCACAAAAAAATACCATGCCTATAAATCCAACAACAAATCCTCCAGAATTGAAGACACTGAAAAGGAAGGCTTCAGATACAACCCTAGATTTGGATCTGTCACTAAAACTAAACTCAAAGATTAATGATGCTGAAGAAGGAACATTAAAGAACCATGAAGTTGATAGCACAAACCTATCACTCTCATTGTGCTCTCAATCCTCATCCTCTAATAATCCTATCAGCAGGTTGATCAAGGAAGCACAACAAGATCGATGTGATGAACAAGGGAAAATGGCCAGTACTCTAGATCTGGCTATATGA 1032 0.3934 MEERHGSQCSKTNPSNIDEDEECESEANEEQSTQKNNGGSSSNSTVEENEKKIRPYVRSKMPRLRWTPDLHLRFVHAVQRLGGQERATPKLVLQLMNVKGLSIAHVKSHLQMFRSKKVDDRNQVFADYNNLVEIGDKNIYNISQLSMLQGYNPSQSSSFSYTNNYPCYGLGDASFGVYEKLLQRPFDWSNAISREGSSIFGEQSKIREPKDEFLSFGAHDSLSARARLSHVDHIPPINILQQRAQKNTMPINPTTNPPELKTLKRKASDTTLDLDLSLKLNSKINDAEEGTLKNHEVDSTNLSLSLCSQSSSSNNPISRLIKEAQQDRCDEQGKMASTLDLAI 343
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma01g01259 343 PANTHER - 6 191 - -
Gma01g01259 343 PANTHER - 187 343 - -
Gma01g01259 343 MobiDBLite consensus disorder prediction 30 46 - -
Gma01g01259 343 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL7-LIKE 187 343 IPR044848 GO:0003700
Gma01g01259 343 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL7-LIKE 6 191 IPR044848 GO:0003700
Gma01g01259 343 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 62 117 IPR006447 GO:0003677
Gma01g01259 343 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 58 118 IPR017930 -
Gma01g01259 343 MobiDBLite consensus disorder prediction 1 54 - -
Gma01g01259 343 Pfam Myb-like DNA-binding domain 64 112 IPR001005 -
Gma01g01259 343 SUPERFAMILY Homeodomain-like 60 116 IPR009057 -
Gma01g01259 343 Gene3D - 61 118 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma01g01259 Gma-Chr1 44879411 44881225 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma01g01259 26 119 G2-like Transcription Factor Family AT2G42660 63.830 2.94e-35 127
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Gma01g01259 Myb_DNA-binding 8.3e-07 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma01g01259 - - gmx:102660246 628.246
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma01g01259 01 44879411 44881225 Gma01g01259 01 44879411 44881225 ECH