Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma01g01250 ATGGGTTCTGGAAACCAGGAGGTATCAATGTTGGTGGAGAATGGTGGTGGTGGGAACAACAACGTGAAGGGATTGCTGAGCAAGGAAATGAGACATGGCAGAACGGCACATAACATGTCATCTTCTTCGTTGCGCAAGAAATCTGACCTAACTCTTCTGTCTAAGGTTCATTCTGACACCCTCAAGAATTTGTTGGTGAATTTGCAAGAGGTTATTCTGGGAACCAAGCTCTCTATTATTTTCCCTGCCATTCCCCTTGCCATTGTTGCTCAAAGCTATGGCTTTGGAAGACCTTGGATTTTTGCGTTGAGCTTACTTGGGCTTACCCCACTTGCTGAACGAGTCAGTTTCTTGACAGAACAGCTCGCTTATTACACTGGTCCCACAGTGGGAGGACTTTTGAATGCAACATGTGGGAATGCTACAGAGCTCATCATAGCAATTTTTGCTCTTAGCAATAACAAAATTGCAGTGGTAAAGTATTCTTTGCTGGGTTCCATAATTTCTAACCTTCTTCTGGTTCTTGGAACCTCTCTATTCTGTTGTGGCATTGCAAACATTAGAAAGGAGCAAAAATATGATAGAAGACAGGCAGATATAAACTTGCTTATGCTGTTTGTGGCATTGCTAAGCCACTTGCTGCCAGTGCTGTTCCATTACGTTGGTGCCTCAGCAGCTGACACTGTAGAGTCTTCTCTGCAGTTGTCAAGAGTTGCTAGCATTGTTATGGTGACTGCTTATTGTGCTTACCTTGTCTTCCAATTGTGGACTCACCGGCAGCTATTTGAAGCCCAAGATGAAGCTGATGAAGAGGGTGGCAATGATTCAGAAGAAGCAGTGATAGGATTCTGGAGTGCATTTGCTTGGCTGGTTGGGATGACAGTGATCATTGCCCTGCTGTCTGAATATGTGGTGCACACAATTGAGGATGCATCTGATTCATGGGGATTGTCTGTTAGCTTCCTAAGCATAATCTTACTACCAATAGTTGGCAATGCAGCTGAACATGCAGGAGCAATCATATTTGCTTTCAAGAACAAACTGGACATCTCATTGGGTGTTTCCTTGGGTTCGGCAACTCAAATTAGCATGTTTGTGGTTCCCCTATGTGTGATTGTTGCTTGGATTCTGGGAATCAAAATGGACCTCAACTTTAACATCCTAGAGACAGGTTCTCTTGCTGTGGCAATAACAATCACAGCCTTCACATTACAGGATGGAACATCTCATTACATGAAAGGCCTTGTTCTCGTACTCTGCTACATTATTATTGGGGCATGCTTTTTTGTACAAAGAACACCCTCCAACCAAACTAATGTTCCTAACATAACGCATAAATCAACAACTGAAGCAGTTTTTAGAGCTCAATAG 1371 0.4318 MGSGNQEVSMLVENGGGGNNNVKGLLSKEMRHGRTAHNMSSSSLRKKSDLTLLSKVHSDTLKNLLVNLQEVILGTKLSIIFPAIPLAIVAQSYGFGRPWIFALSLLGLTPLAERVSFLTEQLAYYTGPTVGGLLNATCGNATELIIAIFALSNNKIAVVKYSLLGSIISNLLLVLGTSLFCCGIANIRKEQKYDRRQADINLLMLFVALLSHLLPVLFHYVGASAADTVESSLQLSRVASIVMVTAYCAYLVFQLWTHRQLFEAQDEADEEGGNDSEEAVIGFWSAFAWLVGMTVIIALLSEYVVHTIEDASDSWGLSVSFLSIILLPIVGNAAEHAGAIIFAFKNKLDISLGVSLGSATQISMFVVPLCVIVAWILGIKMDLNFNILETGSLAVAITITAFTLQDGTSHYMKGLVLVLCYIIIGACFFVQRTPSNQTNVPNITHKSTTEAVFRAQ 456
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma01g01250 456 Pfam Sodium/calcium exchanger protein 99 256 IPR004837 GO:0016021|GO:0055085
Gma01g01250 456 Pfam Sodium/calcium exchanger protein 286 424 IPR004837 GO:0016021|GO:0055085
Gma01g01250 456 PANTHER VACUOLAR CATION/PROTON EXCHANGER 3 3 443 - -
Gma01g01250 456 PANTHER VACUOLAR CALCIUM ION TRANSPORTER 3 443 IPR004713 GO:0006812|GO:0008324|GO:0016021
Gma01g01250 456 TIGRFAM caca2: calcium/proton exchanger 62 429 - -
Gma01g01250 456 Gene3D - 128 429 IPR044880 -
Gma01g01250 456 TIGRFAM cax: calcium/proton exchanger 83 429 IPR004798 GO:0006816|GO:0015369
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma01g01250 Gma-Chr1 44384770 44388816 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma01g01250 27 437 Antiporters AT2G38170 73.012 0.0 595
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma01g01250 K07300 - gmx:100797538 873.233