Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma01g01244 ATGGTGGATGTCATGGTAATGAAGGAGATCAAGGACACGGCGCTGCATCTTGGCGTCGATCTCTCCACTCTCGATCTCGACGCCATTCGCCTCCCACCTGGCGAAAAATGCGGCATCGTCAGAAGTTTGAGAAGCTCGAAGAAGTGGTCTCTGGATGGCCTCTGGATGCCGGTTGATCCTGAAACTGAGAAAACCCTAGGTTACTACTTCATTGAGTACAATACCCCTCAGGAAGCTGAGCTTGCTAAAGAGAAGACTCATGGATTCATGAAGGTGCCTAATGAGTGGGCTCCTCCTGAAACTAAGCCATATGCTCCAGGGGTAAGATTTTGGTCTAGAACCTTGTACCTTATTGATATTTCTGATGCTCTTTGGTGTTGGTATCTCTTACAAGAAAATCTTCAACACTGGCTCACTGATGCAAAGGCCAGGGACCAGTTTGTGATTCATGCTGGTTCAGATACTAAGTTTTGGACAGAGAGTTTTGTGCAATGGTCTCCTTTGGGGACATACTTGGCCACTGTTCATACACAGGGGGCAGCAGTCTAG 549 0.4772 MVDVMVMKEIKDTALHLGVDLSTLDLDAIRLPPGEKCGIVRSLRSSKKWSLDGLWMPVDPETEKTLGYYFIEYNTPQEAELAKEKTHGFMKVPNEWAPPETKPYAPGVRFWSRTLYLIDISDALWCWYLLQENLQHWLTDAKARDQFVIHAGSDTKFWTESFVQWSPLGTYLATVHTQGAAV 182
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma01g01244 182 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 3 EIF3 -RELATED 52 182 IPR011400 GO:0003723|GO:0003743|GO:0005852|GO:0006413|GO:0031369
Gma01g01244 182 Gene3D - 35 95 IPR012677 -
Gma01g01244 182 SUPERFAMILY RNA-binding domain, RBD 54 90 IPR035979 GO:0003676
Gma01g01244 182 PANTHER BNACNNG51870D PROTEIN 52 182 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma01g01244 Gma-Chr1 44100216 44101731 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma01g01244 5 182 Eukaryotic Initiation Factors Gene Family AT5G27640 36.434 1.70e-41 145
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma01g01244 K03253 - gmx:100817394 231.876