Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma01g01233 ATGTGGATGCTTAACAAGCTTAGCTCCCCCTACAGCGACACCGACCAGAAACTAGCCTCGTACTTCCTCCAAGCCTTCTTCAACCGCATCACCCAAGTCGGGGACCGAACCTACAAAACCTTAGCTTCAGCTTCGGAGAAAACATGCTCCTTTAAATCAACCCGCAAAACATACTCCTTTGTCACCGTCGGCGCCAATATGCAGAAGGTCATGAAGGAAATCAGAGCCAGAATGGAGAAGGAGGTTGATTTGGACATTGGATTGGAAGGGTTTGAGTTCGTCAAAGGGTTTGAAGAATGTTTGAGGTGGTTTAGGGTTTACTTTGAGGCCTTGGATGGGAGTTTTCCGCGGACAAGCAACGAGCATTTGATGCTTGAGAGGGAGGCGGGGAGGGCGGTGGTGAACCTGGTGGCGTGTTCTCTGGCGGAGTCCGTAGAGAGGTGGggggtttgggttttttggggttag 468 0.485 MWMLNKLSSPYSDTDQKLASYFLQAFFNRITQVGDRTYKTLASASEKTCSFKSTRKTYSFVTVGANMQKVMKEIRARMEKEVDLDIGLEGFEFVKGFEECLRWFRVYFEALDGSFPRTSNEHLMLEREAGRAVVNLVACSLAESVERWGVWVFWG 155
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma01g01233 155 ProSiteProfiles GRAS family profile. 1 155 IPR005202 -
Gma01g01233 155 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 1 57 IPR005202 -
Gma01g01233 155 PANTHER PROTEIN SHORT-ROOT 79 154 IPR030019 GO:0003700|GO:0005634|GO:0008356|GO:0009956|GO:0043565|GO:0048366
Gma01g01233 155 Pfam GRAS domain family 70 148 IPR005202 -
Gma01g01233 155 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 79 154 IPR005202 -
Gma01g01233 155 PANTHER PROTEIN SHORT-ROOT 1 57 IPR030019 GO:0003700|GO:0005634|GO:0008356|GO:0009956|GO:0043565|GO:0048366
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma01g01233 Gma-Chr1 43414552 43415019 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma01g01233 1 57 GRAS Transcription Factor Family AT4G37650 69.492 2.24e-21 87.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Gma01g01233 GRAS 1.5e-10 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma01g01233 - - gmx:100820459 132.109