Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma01g01226 ATGGAAGGTACTCATCATCTCCATCACCATCACCAAGGGCATCAACAACAACAGCAACAAAGGGTTCTTCCTCAGAATATGAACGTGGATGTGACCGATAGATTTCCTCAATGGAGCATCCAAGAAACAAAGGAGTTTCTGGTGATCCGTGAAGAGCTGGATCAGACTTTCATGGAGACTAAGAGGAACAAGCAGTTGTGGGAAGTGATATCTAACCGAATGAAGGAAAAGGGTTACCATAGAAGTGCAGAGCAGTGCAAGTGCAAGTGGAAAAACCTTGTTACCCGCTATAAGGGATTTGAAACAATGGAGCAAGAAGCGACGAGACAGCAATTCCCGTTTTACAATGAATTCAATGCGATTTTCACAGCAAGGATGCAGAGAATGCTGTGGGCAGAAGCTGAGGGTGGATCAAAGAAGAACAAGGCAACAACGCAGCTCTCATCGGACGAAAATGAAGAGAGTACTGAAGCCGGTAGCGGCAGAAAGAAGAAGAAAGCAAAGATAGGTAGTAGGGGTGGTGATAACTGTAGTGGTAGTTTCAACAGTTTGAAGGAGATTTTGGAGGAGTTCATGAGGCAACAGATGCAAATAGATACACAATGGATGGAAGCGTTTGAGGCGAGGGAGAATGAGAGGAGGCTGAAGGAGATGGAATGGAGACAAGCCATGGAGGTGTTGGAGAATGAGAGGATAATGATGGAGGAAAGATGGAGAGAAAGGGAGGAACAAAGGAGGATTAGGGAAGAAGCTAGGGCTGAGAAGAGGGATGCACTAATCACAGCTTTGCTAAACAAGCTAGAGAGACAAGGAATGTAG 819 0.4542 MEGTHHLHHHHQGHQQQQQQRVLPQNMNVDVTDRFPQWSIQETKEFLVIREELDQTFMETKRNKQLWEVISNRMKEKGYHRSAEQCKCKWKNLVTRYKGFETMEQEATRQQFPFYNEFNAIFTARMQRMLWAEAEGGSKKNKATTQLSSDENEESTEAGSGRKKKKAKIGSRGGDNCSGSFNSLKEILEEFMRQQMQIDTQWMEAFEARENERRLKEMEWRQAMEVLENERIMMEERWREREEQRRIREEARAEKRDALITALLNKLERQGM 272
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma01g01226 272 Gene3D - 38 99 - -
Gma01g01226 272 PANTHER - 1 272 - -
Gma01g01226 272 PANTHER TRANSCRIPTION FACTOR MYB FAMILY-RELATED 1 272 - -
Gma01g01226 272 MobiDBLite consensus disorder prediction 1 22 - -
Gma01g01226 272 MobiDBLite consensus disorder prediction 134 175 - -
Gma01g01226 272 CDD GT1 36 99 - -
Gma01g01226 272 Pfam Myb/SANT-like DNA-binding domain 37 121 IPR044822 -
Gma01g01226 272 MobiDBLite consensus disorder prediction 139 154 - -
Gma01g01226 272 ProSiteProfiles Myb-like domain profile. 38 94 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma01g01226 Gma-Chr1 43179491 43180851 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma01g01226 5 271 Trihelix Transcription Factor Family AT2G38250 55.914 3.89e-70 216
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Gma01g01226 Myb_DNA-bind_4 4.3e-19 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma01g01226 - - gmx:100791013 468.003
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma01g01226 01 43179491 43180851 Gma01g01226 01 43179491 43180851 ECH
Gma03g00446 03 7856369 7858410 Gma01g01226 01 43179491 43180851 GST