Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Gma01g01226 | ATGGAAGGTACTCATCATCTCCATCACCATCACCAAGGGCATCAACAACAACAGCAACAAAGGGTTCTTCCTCAGAATATGAACGTGGATGTGACCGATAGATTTCCTCAATGGAGCATCCAAGAAACAAAGGAGTTTCTGGTGATCCGTGAAGAGCTGGATCAGACTTTCATGGAGACTAAGAGGAACAAGCAGTTGTGGGAAGTGATATCTAACCGAATGAAGGAAAAGGGTTACCATAGAAGTGCAGAGCAGTGCAAGTGCAAGTGGAAAAACCTTGTTACCCGCTATAAGGGATTTGAAACAATGGAGCAAGAAGCGACGAGACAGCAATTCCCGTTTTACAATGAATTCAATGCGATTTTCACAGCAAGGATGCAGAGAATGCTGTGGGCAGAAGCTGAGGGTGGATCAAAGAAGAACAAGGCAACAACGCAGCTCTCATCGGACGAAAATGAAGAGAGTACTGAAGCCGGTAGCGGCAGAAAGAAGAAGAAAGCAAAGATAGGTAGTAGGGGTGGTGATAACTGTAGTGGTAGTTTCAACAGTTTGAAGGAGATTTTGGAGGAGTTCATGAGGCAACAGATGCAAATAGATACACAATGGATGGAAGCGTTTGAGGCGAGGGAGAATGAGAGGAGGCTGAAGGAGATGGAATGGAGACAAGCCATGGAGGTGTTGGAGAATGAGAGGATAATGATGGAGGAAAGATGGAGAGAAAGGGAGGAACAAAGGAGGATTAGGGAAGAAGCTAGGGCTGAGAAGAGGGATGCACTAATCACAGCTTTGCTAAACAAGCTAGAGAGACAAGGAATGTAG | 819 | 0.4542 | MEGTHHLHHHHQGHQQQQQQRVLPQNMNVDVTDRFPQWSIQETKEFLVIREELDQTFMETKRNKQLWEVISNRMKEKGYHRSAEQCKCKWKNLVTRYKGFETMEQEATRQQFPFYNEFNAIFTARMQRMLWAEAEGGSKKNKATTQLSSDENEESTEAGSGRKKKKAKIGSRGGDNCSGSFNSLKEILEEFMRQQMQIDTQWMEAFEARENERRLKEMEWRQAMEVLENERIMMEERWREREEQRRIREEARAEKRDALITALLNKLERQGM | 272 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Gma01g01226 | 272 | Gene3D | - | 38 | 99 | - | - | |
Gma01g01226 | 272 | PANTHER | - | 1 | 272 | - | - | |
Gma01g01226 | 272 | PANTHER | TRANSCRIPTION FACTOR MYB FAMILY-RELATED | 1 | 272 | - | - | |
Gma01g01226 | 272 | MobiDBLite | consensus disorder prediction | 1 | 22 | - | - | |
Gma01g01226 | 272 | MobiDBLite | consensus disorder prediction | 134 | 175 | - | - | |
Gma01g01226 | 272 | CDD | GT1 | 36 | 99 | - | - | |
Gma01g01226 | 272 | Pfam | Myb/SANT-like DNA-binding domain | 37 | 121 | IPR044822 | - | |
Gma01g01226 | 272 | MobiDBLite | consensus disorder prediction | 139 | 154 | - | - | |
Gma01g01226 | 272 | ProSiteProfiles | Myb-like domain profile. | 38 | 94 | IPR001005 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Gma01g01226 | Gma-Chr1 | 43179491 | 43180851 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Gma01g01226 | 5 | 271 | Trihelix Transcription Factor Family | AT2G38250 | 55.914 | 3.89e-70 | 216 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | Trihelix | Gma01g01226 | Myb_DNA-bind_4 | 4.3e-19 | CL0123 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Gma01g01226 | - | - | gmx:100791013 | 468.003 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Gma01g01226 | 01 | 43179491 | 43180851 | Gma01g01226 | 01 | 43179491 | 43180851 | ECH | |
Gma03g00446 | 03 | 7856369 | 7858410 | Gma01g01226 | 01 | 43179491 | 43180851 | GST |