Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma01g01221 ATGGCCAAGCCACAAAATACAAAACCCGGGTGTTTCTCTTTCTCAAGCTTCCTACGCGTGTTTCTATGTGCTGGAAATGGAACTACTCCACCAGTGCACCCTTATCACATTACAGAATCAGAAGAATCAGAAAATGCACATTTCACCAAAGAAAAAATGGTGGTGAATGATAATGATGATATTGCTTCTGCCCCTGGAGTGGTGGCAAGGCTAATGGGGCTGGATTCATTTCCAAACCCCAAATGGGTAGTGAAATGTGGCACCCCAGATTCGGTTCCTAGAAGCAGGTCAGTGAACTTTGTGGATTACTTGCTTGAGTTTGATGCAAGCCATGTTAGTAGCCATAGGAGGGTGAAGACCTCGGCATCGTTCAGAGAGGTTCCTAGTTTGGTTCAGAACCAAAAGGGTAATGGTTATGGTAATGGTAATAATCTCTTTGTGTTTTGCATGGCTGGTGACAATAACATGAGGGAAGAGCAAGAGGGTAGAAATGAGATGAGGGAAGTGGAAAAGTTGAGGCAGAGGAAGAGGCAGAAGGAGAGTGTGAGTGTGAAGAAAGAGAGGAATCAAGGGAAGAAGAACAAGAAGATTTCCAAGCTGAAGAATGAACCAAGGAGGGTCCCTTCTTCTTCTAAGAATGGTTCAAGGGGTCGAAATCATCATGGTGAGGTTAGAGATTTTTCTTCTGTGTCCTCAAACCCCTCTAAGTGTAGTAGTTCTTGTAGTAGCAGACACAATGGTGCTAGTTCAAGAACAAGGTTCAACACTTCTTTGCCAAATAAGAACAAAAAGGGGGTTGTGGAACCAAATATCAGGAATAGAAACCAGCAGTCAGTGTTGAAGGAAGAAAGTGAATGCAGCTTGGAAAACCACAGTCCTGTTTCAGTTGTAGAGAGCAATGACTATCTTTTCCTGTATGGAGCTGATTTTCTAGATGGTTCAAGCTCCCTTACGTCAAAGTGGGAATCTCCATCACTATTGTCCTTGGGTGATGATGTTGAAGACAATGCAAGTACTAATGAAGGTTATACCTTCATTGATGTCAACAAGGAAGCAGAGTATTACTCAGAATTGATGTTGAAGCTTCGTACTTTGACTGAACAGGATATAAGAGAATCAGATTGTACCTCAAAACGTGTACGCGATATTGAAAGCTTTGGGGATATTTGTTTGATGTTTGAGCATAAAATTTTCGACCACTTATTATATGAGGTCGTCAATGAAGTTATAGAACTTTATTGTTGA 1245 0.4169 MAKPQNTKPGCFSFSSFLRVFLCAGNGTTPPVHPYHITESEESENAHFTKEKMVVNDNDDIASAPGVVARLMGLDSFPNPKWVVKCGTPDSVPRSRSVNFVDYLLEFDASHVSSHRRVKTSASFREVPSLVQNQKGNGYGNGNNLFVFCMAGDNNMREEQEGRNEMREVEKLRQRKRQKESVSVKKERNQGKKNKKISKLKNEPRRVPSSSKNGSRGRNHHGEVRDFSSVSSNPSKCSSSCSSRHNGASSRTRFNTSLPNKNKKGVVEPNIRNRNQQSVLKEESECSLENHSPVSVVESNDYLFLYGADFLDGSSSLTSKWESPSLLSLGDDVEDNASTNEGYTFIDVNKEAEYYSELMLKLRTLTEQDIRESDCTSKRVRDIESFGDICLMFEHKIFDHLLYEVVNEVIELYC 414
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma01g01221 414 PANTHER OS05G0128300 PROTEIN 1 413 - -
Gma01g01221 414 PANTHER ALC-INTERACTING PROTEIN 1 1 413 - -
Gma01g01221 414 MobiDBLite consensus disorder prediction 158 285 - -
Gma01g01221 414 Pfam DUF761-associated sequence motif 64 78 IPR032795 -
Gma01g01221 414 Coils Coil 155 189 - -
Gma01g01221 414 MobiDBLite consensus disorder prediction 158 188 - -
Gma01g01221 414 MobiDBLite consensus disorder prediction 226 285 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma01g01221 Gma-Chr1 43089455 43091571 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma01g01221 1 409 TRM (TON1 Recruiting Motif) Superfamily AT5G01370 26.724 4.38e-14 71.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma01g01221 - - gmx:102668485 786.563
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma01g01221 01 43089455 43091571 Gma01g01221 01 43089455 43091571 ECH