Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma01g01208 ATGGGCCTAAAAAGAGGGCCAAAGATGCATGATGTGTTCCTCAACTTCAGAGGGGAAGATACCCGTGACAACTTCATTAGTCACATTTATGAAGAACTACAGAGGAAAAAGATTGAAACATATATAGATTACAGACTAGCCAGAGGCGAAGAGATTTCACCTGCTCTCCACAGAGCAATAGAAAAATCTACGATTTATGTTGTCATTTTCTCCCAGAACTATGCATCTTCCACATGGTGTTTGGAAGAACTCACAAAGATACTCGATTGCAAGAACAGATATGGAAGGGATGTGATCCCAGTTTTCTATAAGGTGGATCCATCAATTGTTAGGCATCAGAGAGAGACATATGCAGAAGCATTGGTTAAGCATGAACATCGATTTAAAGACAACCTCGGCAAAGTGCATGCATGGAAGGCTGCTCTAAAAGAAGCAGCTGGGCTCGTGGGCTGGCATTCACAAGTAACCAGACCAGAAGCCACAGAAGCCACACTTGTTGCAGAAGTTGTGAAAGATATTTTGAAAAAATTGAATAGTTCTTCCAGTAGTGATCATCAAGGAATTGTTGGAATTGAAAACCATGTAAGACGAATCCAGTCCTTGATGAACCTTGAGTCACCGGATATTCGGATCATAGGAATTTGGGGCTCGGAGGGAATTGGAAAGACTATAATTGCAAGGCAAATATATCACAAATTGGCGTCACATTTCGGTTCCAGCAGTCTTGTTTTAAATGTTCAAGAAGAAATAGAAAGACATGGAATAGACCATATAATAAGCGAATATACATCAGAGCTTTTAGAGAAAGACAGAAGTTTTTCAAATAAAAGACTCAAACGGACAAAGGTTCTCCTCATTCTTGATGATGTTTAA 873 0.3975 MGLKRGPKMHDVFLNFRGEDTRDNFISHIYEELQRKKIETYIDYRLARGEEISPALHRAIEKSTIYVVIFSQNYASSTWCLEELTKILDCKNRYGRDVIPVFYKVDPSIVRHQRETYAEALVKHEHRFKDNLGKVHAWKAALKEAAGLVGWHSQVTRPEATEATLVAEVVKDILKKLNSSSSSDHQGIVGIENHVRRIQSLMNLESPDIRIIGIWGSEGIGKTIIARQIYHKLASHFGSSSLVLNVQEEIERHGIDHIISEYTSELLEKDRSFSNKRLKRTKVLLILDDV 290
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma01g01208 290 Gene3D - 189 290 IPR027417 -
Gma01g01208 290 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 11 289 IPR044974 GO:0006952
Gma01g01208 290 ProSiteProfiles TIR domain profile. 8 177 IPR000157 GO:0007165
Gma01g01208 290 SUPERFAMILY Toll/Interleukin receptor TIR domain 5 151 IPR035897 -
Gma01g01208 290 Pfam NB-ARC domain 192 290 IPR002182 GO:0043531
Gma01g01208 290 Pfam TIR domain 10 190 IPR000157 GO:0007165
Gma01g01208 290 Gene3D - 7 185 IPR035897 -
Gma01g01208 290 PANTHER RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 11 289 - -
Gma01g01208 290 SMART till_3 9 148 IPR000157 GO:0007165
Gma01g01208 290 PRINTS Disease resistance protein signature 211 226 - -
Gma01g01208 290 PRINTS Disease resistance protein signature 277 290 - -
Gma01g01208 290 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 179 290 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma01g01208 Gma-Chr1 42786808 42794950 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma01g01208 8 290 WRKY Transcription Factor Family AT4G12020 29.932 2.38e-33 127
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma01g01208 - - gmx:100814075 484.182