Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma01g01190 ATGAAGTTTATTCTTTTTCTGATTAGTATGATAGTTTATATACTGTTTTTCCCTTTTCTCATAGTTTTCACAGCAGCAGAAACTTCATCCATCACACAATCCCAGTCCCTCAGTTACAGAAAGACCCTAGTTTCCCCAAGTGGAATCTTCGAACTCGGTTTCTTCAATCTTGGAAATCCGAACAAAATCTACCTTGGAATTTGGAACAAGAATATTCCACTTCAAAACATAGTTTGGGTTGCAAACGGTGGTAGTCCAATCAAGGATTCTTCTTCCATCTTGAAACTAGACAGTTCTGGCAATTTGGTCCTTACACACAACAACACAGTTGTTTGGAGCACAAGTTCTCCAGAAAAGGCACAGAATCCGGTGGCAGAGCTCTTGGATTCTGGCAATCTTGTGATAAGAGATGAGAATGGAGGAAATGAAGACGCATATATGTGGCAAAGCTTTGATTACCCATCTAATACTATGCTGCAAGGAATGAAGGTTGGATGGGACCTCAAAAGAAATTTTAGTACTCGCCTGATAGCTTGGAAGAGTGACGATGATCCAACCCAAGGAGACTTATCTTGGGGCATTATCCTGCACCCTTATCCTGAGATCTATATGATGAAGGGAACAAAAAAGTACCATAGACTTGGACCATGGAATGGTTTGCGTTTCAGTGGCTTTCCACTTATGAAGCCTAATAACCACATATACTATTCTGAGTTTGTCTGCAACCAGGAAGAGGTTTATTTCAGATGGAGCCTCAAGCAGACTAGTTCAATATCAAAAGTGGTACTTAACCAAACCACACTGGAACGTCAGCGTTATGTATGGTCTGGGAAATCATGGATTTTATATGCAGCACTGCCAGAAGACTACTGTGACCATTATGGAGTTTGTGGAGCCAATACATACTGCACCACTTCTGCATTACCAATGTGTCAATGTTTAAAAGGGTTCAAGCCTAAGTCTCCTGAGGAATGGAACTCAATGAACTGGTCTGAAGGATGTGTCCGGAAACATCCACTTAGCTGCAAAAATAAGCTCAGTGATGGGTTTGTACTAGTGGAAGGCTTGAAAGTGCCGGATACTAAAGATACGTTTGTGGATGAGACTATTGATCTAAAACAATGCAGAACCAAGTGCTTGAATAAATGTTCCTGCATGGCGTATACCAATTCAAATATAAGTGGAGCAGGCAGTGGCTGTGTTATGTGGTTTGGTGATTTATTTGACATCAAACTGTATCCAGAGAATGGGCAGAGTCTATATATAAGGTTGCCTGCTTCAGAATTAGAGTTTATCAGGTACAAGAGGAACTCTATAATAATAATTGTAACCTCCGTTGCTGCAACTTTGGTAGTGATGGTAGTGACACTTGCTATTTATTTCATCAGAAGAAGGAAAATTGCCGACAAGTCAAAGACAGAAGAGAACATCGAAAGACAGCTAGATGATATGGATGTGCCATTGTTTGATCTTCTAACAGTCACTACTGCCACCAACAATTTTTCATTGAATAATAAGATTGGACAAGGTGGTTTTGGACCTGTATATAAGGGAGAATTAGTGGATGGGCGAGAAATTGCTGTCAAGCGACTATCAACTAGCTCTGGACAAGGAATAAATGAGTTCACAGCAGAAGTAAAACTGATTGCAAAGCTTCAACACCGAAATCTTGTAAAGCTCCTTGGCTGTTGCTTTCAAGGACAAGAAAAATTACTAATATATGAATACATGGTTAATGGCAGCCTAGACACCTTCATTTTTGATAAAGTGAAAGGTAAATTATTGGATTGGCCCCGACGCTTCCACATAATACTTGGAATTGCTAGAGGACTTTTGTATCTCCATCAAGATTCCCGATTAAGGATTATTCATAGAGATCTCAAAGCAAGTAATGTTTTACTTGATGAAAAGTTCAATCCTAAAATATCAGATTTTGGAACAGCAAAAGCTTTTGGAGGAGACCAAATCGAAGGAAACACAAAAAGAGTAGTTGGGACTTATGGATACATGGCCCCAGAATATGCTGTTGCTGGACTATTTTCAATCAAATCAGACGTTTTCAGCTTTGGTATTTTACTGTTGGAGATTGTATGTGGAATAAAAAATAAAGCTCTTTGTGATGGAAACCAGATTCATAGCCTTGCATGGACACTTTGGAAAGAGAAAAATGCTTTACAGTTGATTGACTCAAGCATAAAGGACTCATGTGTTATCTCAGAAGTACTGCGATGCATCCATGTTAGTCTCTTGTGCTTGCAACAATACCCGGGAGATAGGCCAACCATGACATCAGTAATTCAAATGTTAGGGACTGAACATACTGCACTGACGCACAATTTGCATTGCAAGTCTTAA 2355 0.3958 MKFILFLISMIVYILFFPFLIVFTAAETSSITQSQSLSYRKTLVSPSGIFELGFFNLGNPNKIYLGIWNKNIPLQNIVWVANGGSPIKDSSSILKLDSSGNLVLTHNNTVVWSTSSPEKAQNPVAELLDSGNLVIRDENGGNEDAYMWQSFDYPSNTMLQGMKVGWDLKRNFSTRLIAWKSDDDPTQGDLSWGIILHPYPEIYMMKGTKKYHRLGPWNGLRFSGFPLMKPNNHIYYSEFVCNQEEVYFRWSLKQTSSISKVVLNQTTLERQRYVWSGKSWILYAALPEDYCDHYGVCGANTYCTTSALPMCQCLKGFKPKSPEEWNSMNWSEGCVRKHPLSCKNKLSDGFVLVEGLKVPDTKDTFVDETIDLKQCRTKCLNKCSCMAYTNSNISGAGSGCVMWFGDLFDIKLYPENGQSLYIRLPASELEFIRYKRNSIIIIVTSVAATLVVMVVTLAIYFIRRRKIADKSKTEENIERQLDDMDVPLFDLLTVTTATNNFSLNNKIGQGGFGPVYKGELVDGREIAVKRLSTSSGQGINEFTAEVKLIAKLQHRNLVKLLGCCFQGQEKLLIYEYMVNGSLDTFIFDKVKGKLLDWPRRFHIILGIARGLLYLHQDSRLRIIHRDLKASNVLLDEKFNPKISDFGTAKAFGGDQIEGNTKRVVGTYGYMAPEYAVAGLFSIKSDVFSFGILLLEIVCGIKNKALCDGNQIHSLAWTLWKEKNALQLIDSSIKDSCVISEVLRCIHVSLLCLQQYPGDRPTMTSVIQMLGTEHTALTHNLHCKS 784
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma01g01190 784 ProSiteProfiles Protein kinase domain profile. 501 776 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma01g01190 784 SMART blect_4 34 154 IPR001480 -
Gma01g01190 784 SUPERFAMILY Protein kinase-like (PK-like) 484 769 IPR011009 -
Gma01g01190 784 SUPERFAMILY alpha-D-mannose-specific plant lectins 77 185 IPR036426 -
Gma01g01190 784 Pfam D-mannose binding lectin 77 180 IPR001480 -
Gma01g01190 784 Pfam Protein tyrosine and serine/threonine kinase 502 769 IPR001245 GO:0004672|GO:0006468
Gma01g01190 784 ProSiteProfiles Bulb-type lectin domain profile. 28 148 IPR001480 -
Gma01g01190 784 Gene3D Transferase(Phosphotransferase) domain 1 577 781 - -
Gma01g01190 784 Pfam S-locus glycoprotein domain 213 321 IPR000858 GO:0048544
Gma01g01190 784 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 37 773 - -
Gma01g01190 784 PIRSF SRK 1 782 IPR024171 GO:0004674
Gma01g01190 784 PANTHER S-LOCUS LECTIN KINASE FAMILY PROTEIN 37 773 - -
Gma01g01190 784 CDD PAN_AP_plant 338 425 - -
Gma01g01190 784 ProSitePatterns Serine/Threonine protein kinases active-site signature. 622 634 IPR008271 GO:0004672|GO:0006468
Gma01g01190 784 CDD B_lectin 34 154 IPR001480 -
Gma01g01190 784 SMART serkin_6 501 776 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma01g01190 784 CDD STKc_IRAK 507 769 - -
Gma01g01190 784 ProSiteProfiles PAN/Apple domain profile. 342 425 IPR003609 -
Gma01g01190 784 Gene3D - 22 151 IPR036426 -
Gma01g01190 784 SMART ntp_6 345 424 IPR003609 -
Gma01g01190 784 Pfam PAN-like domain 342 410 IPR003609 -
Gma01g01190 784 Gene3D Phosphorylase Kinase; domain 1 462 576 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma01g01190 Gma-Chr1 42203761 42212738 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma01g01190 437 776 Receptor kinase-like Gene Family AT4G23230 52.464 6.02e-115 360
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Gma01g01190 PK_Tyr_Ser-Thr 4.8e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma01g01190 - - gmx:100796821 1559.66