Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma01g01189 ATGGACATGGACGTGGAAGAAGCTTCTGCACCTAAAGAGAGAAAGCCCGTTTTGGTGATCTTGGTGGGCGCTCCAGGGAGCGGGAAGTCCACCTTCTGCGAAGAAGTTATGGGTTCCTCTACTCGCCCTTGGGTTCGCGTATGCCAGGACACTATTGGAAATGGTAAAGCAGGAAATAAAGCTCAGTGCCTAAGCAGTGCAACTAGAGCATTGAAGGATGGGAAGAGTGTATTTATTGATAGGTGCAATCTTGACAGAGAACAGCGTTCAGAATTTATAAAGCTTGGTGATGGACCCCAAATAGATGTCCATGCAGTTGTACTTGATCTTCCTGCTAAGCTTTGTATTTCTCGATCAGTCAAACGAACTGGGCATGAAGGAAATTTGCAGGGTGGAAAAGCTGCTGCAGTTGTGAATAGAATGCTTCAACATAAAGAGCTTCCCAAATTAAGTGAAGGCTTTAGCCGGATAACATTTTGTCAGAATGAAAGTGATGTAAAAAATGCTCTTAACACATACAGCACACTTGGGCCACTGGATAGTCTTCAATATGGCTGCTTTGGCCAGAAGAATCCTGATTCCAAAATTCAAGTTGGTATAATGAAGTTCCTTAAAAGAGCAGAGGTCCCAGTTGCTGCTGCATCTAGAGAGAGTGGCATTGAAGACCCTACTTCCCAGACTCCGGGTAAAAATAACTCCTGCTGCAAAGATAAGCAAACATTTTCCTCAATTCCTGATAATGACAACTCAGAGACGAAGGAAGTAGAAAACCAAGCAGTTGGCTCTGTTGATTCCCATGCCAATCAAGTTTCTCTGGATGATATTCCCACTCTGGCATTTCCATCTATTTCAACATCTGATTTTCAATTCAACCATGAGAAGGCAGCTGATATTATTGTTGAGAAGGTTGCAGAGTTCTCAAATAAGTTTAGGAATGCCAGACTTGTTCTTGTTGACTTGTCTCATAAATCAAAGATTCTGTCCTTAGTTAAGGCTAAAATTGCAGGAAAAAACATTGATGCCCAAAAGTTCTTTACCCATGTTGGGGACATTACTCATCTTTATTCCAGGGGAGGTTTGCGATGTAATGTCATTGCTAACGCTGCCAACTGGAGGTTAAATCCTGGAGGTGGAGGTGTAAATGCAGCAATTTTTAATGCTGCAGGTCCTGAACTGGAGTCTGCAACAAAAGAAAAAGTACAATCTCTTTCTCCTGGGAATGCTGCTGTTGTTCCTCTACCTTCATCTTCTCCTTTGTTCACCAGAGAGGGTGTAACCCATGTAATACATGTTGTTGGACCTAATATGAACCCACAAAGACCAAATTGTCTAAATAATGATTATAATAAAGGCTGCAAAATTCTCCAAGATGCTTATACTTCACTTTTTGAAGGCTTTGCATCTATTGTGAGGAACCAGACATGGCATCCAGTAGGAAAAAGTGAAAACCTTGAAAGGAAGTCTTTAGAGTTGCAGGTTCAGTCTGATTGTTCCAGAAATTATTTCACAAAAACTGATCAAAAGAGTAAGAGAGATGTTGATCATGGATTGGGAAAAAGTAAGAAATACAAGGGGACTCGGGATGACTCTGGATTGACCTTTACTGATTCTAGGAATGAAAATGTTGATTCAGAGCATAGAACTGAGAGGAGCATGACTAAGACATGGGGATCATGGGCTCAAGCTCTTCACCAAATAGCTATGCATCCAGAAAAGCTTAAGGATGACTTGCTTGAAATTTCCGATGATGTTGTTGTATTGAATGATATGTATCCCAAGGCACGGAAGCATGTTCTGGTGTTGGCACGAACCGGAGGTCTTGATTGCCTTGCAGATGTCCAAAAGGAGCACCTTCAGTTATTGAACAAGATGCATGATGTGGGTTTAAAGTGGGCTGAGAAGTTCTTGAACGAGAATGCTTCCCTGGTATTTCGTCTCGGATATCACTCGGCACCATCAATGCGACAACTACATTTACATGTTATTAGCCAGGACTTCGAATCAATACATTTAAAGAACAAGAAGCACTGGAACTCATTTAACACAGCTTTCTTTCTTGACTCGGTAGATGTAATGGATGAGATCTCTAGTGATGGGAAGGCAAAATTGAAAGATGATGACAAACTACTGTCTATGGAGTTGAGGTGCCACAGATGTAGAAGTGCACATCCAAACATACCGCGTTTAAAATTACATATTAGCAGCTGCCAATCCCCCTTTCCTGCTCACCTGCTTCAACACGGACGTTTGGTGCATGCACCAGGAGAACCTCATAGCAATGTCCAGTAG 2289 0.4198 MDMDVEEASAPKERKPVLVILVGAPGSGKSTFCEEVMGSSTRPWVRVCQDTIGNGKAGNKAQCLSSATRALKDGKSVFIDRCNLDREQRSEFIKLGDGPQIDVHAVVLDLPAKLCISRSVKRTGHEGNLQGGKAAAVVNRMLQHKELPKLSEGFSRITFCQNESDVKNALNTYSTLGPLDSLQYGCFGQKNPDSKIQVGIMKFLKRAEVPVAAASRESGIEDPTSQTPGKNNSCCKDKQTFSSIPDNDNSETKEVENQAVGSVDSHANQVSLDDIPTLAFPSISTSDFQFNHEKAADIIVEKVAEFSNKFRNARLVLVDLSHKSKILSLVKAKIAGKNIDAQKFFTHVGDITHLYSRGGLRCNVIANAANWRLNPGGGGVNAAIFNAAGPELESATKEKVQSLSPGNAAVVPLPSSSPLFTREGVTHVIHVVGPNMNPQRPNCLNNDYNKGCKILQDAYTSLFEGFASIVRNQTWHPVGKSENLERKSLELQVQSDCSRNYFTKTDQKSKRDVDHGLGKSKKYKGTRDDSGLTFTDSRNENVDSEHRTERSMTKTWGSWAQALHQIAMHPEKLKDDLLEISDDVVVLNDMYPKARKHVLVLARTGGLDCLADVQKEHLQLLNKMHDVGLKWAEKFLNENASLVFRLGYHSAPSMRQLHLHVISQDFESIHLKNKKHWNSFNTAFFLDSVDVMDEISSDGKAKLKDDDKLLSMELRCHRCRSAHPNIPRLKLHISSCQSPFPAHLLQHGRLVHAPGEPHSNVQ 762
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma01g01189 762 Pfam Macro domain 366 441 IPR002589 -
Gma01g01189 762 Gene3D Leucine Aminopeptidase, subunit E, domain 1 226 323 IPR043472 -
Gma01g01189 762 SUPERFAMILY Macro domain-like 324 464 IPR043472 -
Gma01g01189 762 ProSitePatterns HIT domain signature. 645 663 IPR019808 -
Gma01g01189 762 MobiDBLite consensus disorder prediction 214 262 - -
Gma01g01189 762 ProSiteProfiles Macro domain profile. 331 510 IPR002589 -
Gma01g01189 762 PANTHER APRATAXIN 15 755 IPR026963 GO:0003677|GO:0006281|GO:0033699
Gma01g01189 762 SUPERFAMILY Macro domain-like 274 319 IPR043472 -
Gma01g01189 762 Gene3D Leucine Aminopeptidase, subunit E, domain 1 324 470 IPR043472 -
Gma01g01189 762 PANTHER APRATAXIN-RELATED 15 755 - -
Gma01g01189 762 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 14 161 IPR027417 -
Gma01g01189 762 SUPERFAMILY HIT-like 544 720 IPR036265 -
Gma01g01189 762 MobiDBLite consensus disorder prediction 219 262 - -
Gma01g01189 762 SMART YBR022w_8 343 482 IPR002589 -
Gma01g01189 762 MobiDBLite consensus disorder prediction 508 549 - -
Gma01g01189 762 Pfam AAA domain 18 144 - -
Gma01g01189 762 Pfam C2HE / C2H2 / C2HC zinc-binding finger 681 734 IPR032566 -
Gma01g01189 762 Pfam Scavenger mRNA decapping enzyme C-term binding 568 676 - -
Gma01g01189 762 Gene3D - 3 175 IPR027417 -
Gma01g01189 762 Gene3D - 558 739 IPR036265 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma01g01189 Gma-Chr1 42197070 42202128 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma01g01189 1 751 C2H2 Transcription Factor Family AT5G01310 57.895 0.0 868
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma01g01189 01 42197070 42202128 Gma01g01189 01 42197070 42202128 ECH