Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma01g01180 ATGGGTTGGCTTTTTCATAGAAGTCATCTAAAAGTTAAGCTAGGCTCCATGACTCCTTTCCATGATTTGTTCCAATTCAATCTGCTGACTTGGCTACTTGACTTCTCCATAGACAATGGTTGGTGTGGTGTGATGAAGAAACTCTTGGACATTATATTTGAGGGTGGTGTTGAAGCAAGAAAACATGCCTCCATTGAGCTTCCATTATTCAACATGGGTCTTCTACACAGAGCTATAAAGAGAACTATAGGCCTATGGTAG 261 0.4061 MGWLFHRSHLKVKLGSMTPFHDLFQFNLLTWLLDFSIDNGWCGVMKKLLDIIFEGGVEARKHASIELPLFNMGLLHRAIKRTIGLW 86
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma01g01180 86 PANTHER SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 4 1 82 IPR044817 GO:0003677
Gma01g01180 86 PANTHER TRANSCRIPTION FACTOR SBP FAMILY-RELATED 1 82 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma01g01180 Gma-Chr1 41927484 41927744 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma01g01180 1 81 SBP-box Gene Family AT3G60030 43.373 5.84e-15 66.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma01g01180 - - gsj:114419913 142.51