Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma01g01176 ATGGCAAGTTCAGTTGTGGTTGCTAATGGGAACTTGAATCCAAATGATACAAGGGGAAAGACCATTACATGCAAAGCTGCCGTGGCATATGGTCCTGGAGAGCCCTTTGTGGTGGAACGTATCCTTGTCCATCCTCCTCAGAAAATCGAGGTTCGAATCAAGATCCTCTTCACCACAATCTGTCACACGGATCTCACGGCTTGGCAAGGCGAGAATGAGGCTCGACGTGCTTATCCTCGGATTTTTGGCCATGAAGCTTCCGGGATTGTGGAGAGTGTGGGTGAAGGTGTAAGTGACATGAATGAAGGGGACTTGGTGGTGCCAATCTTCAATGGGGAATGTGGGGATTGCAAATATTGCAAGTGCGAGAAGACCAACAAGTGTGAGAGATTTGGGGTGGATGCTATGAAGAAGGTGATGGTTAGTGATGGTGCAACAAGGTTTTACACAATGGATGGAAAACCCATATTCCATTTCTTGAACACTTCAACTTTCACTGAGTACACAGTGGTGGATTCAGCATGCATCGTCAAGATTCACATTGATGGTAGTAATGGCGATCTCAACCGCAATATCAAAAGACTCACCTTACTCAGTTGTGGCGTATCTTCGGGTGTTGGGGCTGCTTGGAATACCGCTGATGTGCATTTTGGTTCAACTGTAGCTGTCTTTGGTTTAGGTGTTGTGGGTCTCGCTGTAGCAGAAGGGGCACGAGCCAGAGGTGCATCCAGAATTATAGGCGTAGATATCAACTCAGACAAATTCATCAAAGCCCGAGAAATGGGTATCACCGACTTCATAAATCCAAAGGATGATGAGAGACCAGTATATGAGATAATTGGGGAAATGACTGGTGGGGGCGTGCACTATAGTTTTGAATGTGCTGGAAATTTGAACGTTCTAAGGGATGCCTTCTTGTCTGCTCATGAGGGTTGGGGATTGACTGTGCTAGTAGGGATTCATCTATCACCAAAAATGCTTCCCATCCACCCAATGGAGTTGTTCCATGGTCGCAGAATAGTAGGATCAAATTTCGGAGGCATCAAAGGGAAGACTCAATTGCCACATTTTGCCAAAGAATGCATGAATGGAGTGGTGAAGTTAGATGATTTTATCACTCACGAGCTTCCTTTCAAGGAGATAAACCAGGCCTTCGATCTTTTGACCACTGGAAAGTCACTGAGATGTCTTCTACACTTCTGA 1203 0.4572 MASSVVVANGNLNPNDTRGKTITCKAAVAYGPGEPFVVERILVHPPQKIEVRIKILFTTICHTDLTAWQGENEARRAYPRIFGHEASGIVESVGEGVSDMNEGDLVVPIFNGECGDCKYCKCEKTNKCERFGVDAMKKVMVSDGATRFYTMDGKPIFHFLNTSTFTEYTVVDSACIVKIHIDGSNGDLNRNIKRLTLLSCGVSSGVGAAWNTADVHFGSTVAVFGLGVVGLAVAEGARARGASRIIGVDINSDKFIKAREMGITDFINPKDDERPVYEIIGEMTGGGVHYSFECAGNLNVLRDAFLSAHEGWGLTVLVGIHLSPKMLPIHPMELFHGRRIVGSNFGGIKGKTQLPHFAKECMNGVVKLDDFITHELPFKEINQAFDLLTTGKSLRCLLHF 400
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma01g01176 400 Gene3D - 27 395 - -
Gma01g01176 400 PANTHER ALCOHOL DEHYDROGENASE 17 399 - -
Gma01g01176 400 SUPERFAMILY GroES-like 17 182 IPR011032 -
Gma01g01176 400 PANTHER ALCOHOL DEHYDROGENASE-LIKE 3 17 399 - -
Gma01g01176 400 ProSitePatterns Zinc-containing alcohol dehydrogenases signature. 83 97 IPR002328 GO:0008270|GO:0016491
Gma01g01176 400 Gene3D - 205 343 - -
Gma01g01176 400 SUPERFAMILY GroES-like 350 400 IPR011032 -
Gma01g01176 400 Pfam Zinc-binding dehydrogenase 229 348 IPR013149 -
Gma01g01176 400 Pfam Alcohol dehydrogenase GroES-like domain 50 177 IPR013154 -
Gma01g01176 400 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 195 364 IPR036291 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma01g01176 Gma-Chr1 41773235 41781448 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma01g01176 50 388 Monolignol Biosynthesis Gene Families AT2G21890 24.011 1.21e-10 60.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma01g01176 K00001 - gmx:100785720 784.252