Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma01g01173 ATGGAAGATCCAGAGGTTATTATTGGGAGCTTGAATCCAAATGATACCAGGGGAAAGACCGTTACTTGCAAAGCTGCCGTGGCATATGGTCCTGGAGAGCCCTTTGTGGTGGAACGTGTTCTTGTTCATCCTCCTCAGAAAATGGAGGTTCGAATCAAGATCCTCTTCACTTCAATCTGCCACACCGATCTCAGTGCTTGGCAAGGCGAGAATGAGGCTCAACGTGCATATCCTCGGATTTTCGGCCATGAAGCTTCCGGGATTGTGGAGAGTGTGGGTGAAGGAGTAAATGACATGAAAGAAGGGGACTTGGTGGTGCCAATTTTCAATGGGGAATGTGGGGATTGTAAATATTGCAAGTGTGAGAAAACCAACATGTGTGAGAGATTTGGGGTGGATCCTATGAAGAAGGTGATGGCTAGTGATGGTGCCACTAGGTTTTCTACAATGGATGGAAAACCCATCTTCCATTTCTTGAACACTTCAACTTTCACGGAGTACACGGTGGTGGATTCAGCATGCGTCGTCAAGATTCACGTTGATGGCGATGGCGACCTCAATCCCTACATTAAAAGACTTACCTTACTCAGTTGTGGTGTATCTACGGGTGTTGGAGCTGCTTGGAATACCGCTGATGTGCATTTTGGTTCAGCTGTAGCTGTCTTTGGTTTAGGTGCTGTGGGTCTCTCTGTAGCAGAAGGGGCACGAGCCAGAGGTGCATCCAAAATAATAGGCGTGGACATCAATTCTGACAAATTTATCAAAGCCCGAGCAATGGGCATCACTGACTTCATAAATCCAAGGGATGATGAGAAGCCAGTATATGAGAGGATCAGGGAAATGACTTGTGGAGGTGTGCACTATAGTTTTGAATGTACTGGAAATTTAAACGTTCTAAGGGATGCCTTCTTGTCAGCTCATGAGGGTTGGGGATTGACTGTGATATTAGGGATTCATCCATCACCACAATTGCTTCCCATCCACCCAATGGAGTTGTTCCAAGGTCGCAGAATAGTAGGATCAGTTTTTGGAGGCTTCAAAGGGAAGACTCAATTGCCACATTTTGCCAAAGAATGCATGGATGGAGTGGTGAAGTTGGATGATTTTATCACTCACGAGCTTCCAATCGAGGAGATAAACAAGGCCTTTGATCTTTTAACCGTCGGAAAGTCACTGAGATGTCTTCTACACTTCTAA 1197 0.457 MEDPEVIIGSLNPNDTRGKTVTCKAAVAYGPGEPFVVERVLVHPPQKMEVRIKILFTSICHTDLSAWQGENEAQRAYPRIFGHEASGIVESVGEGVNDMKEGDLVVPIFNGECGDCKYCKCEKTNMCERFGVDPMKKVMASDGATRFSTMDGKPIFHFLNTSTFTEYTVVDSACVVKIHVDGDGDLNPYIKRLTLLSCGVSTGVGAAWNTADVHFGSAVAVFGLGAVGLSVAEGARARGASKIIGVDINSDKFIKARAMGITDFINPRDDEKPVYERIREMTCGGVHYSFECTGNLNVLRDAFLSAHEGWGLTVILGIHPSPQLLPIHPMELFQGRRIVGSVFGGFKGKTQLPHFAKECMDGVVKLDDFITHELPIEEINKAFDLLTVGKSLRCLLHF 398
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma01g01173 398 Gene3D - 203 341 - -
Gma01g01173 398 Pfam Alcohol dehydrogenase GroES-like domain 49 177 IPR013154 -
Gma01g01173 398 PANTHER ALCOHOL DEHYDROGENASE-LIKE 3 16 397 - -
Gma01g01173 398 Gene3D - 26 393 - -
Gma01g01173 398 ProSitePatterns Zinc-containing alcohol dehydrogenases signature. 82 96 IPR002328 GO:0008270|GO:0016491
Gma01g01173 398 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 194 362 IPR036291 -
Gma01g01173 398 PANTHER ALCOHOL DEHYDROGENASE 16 397 - -
Gma01g01173 398 SUPERFAMILY GroES-like 348 398 IPR011032 -
Gma01g01173 398 Pfam Zinc-binding dehydrogenase 226 346 IPR013149 -
Gma01g01173 398 SUPERFAMILY GroES-like 16 185 IPR011032 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma01g01173 Gma-Chr1 41718934 41733248 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma01g01173 49 386 Monolignol Biosynthesis Gene Families AT2G21890 25.779 7.17e-12 64.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma01g01173 K00001 - gmx:100787307 819.69