Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma01g01154 ATGAAAGAAAATGTTCTTCCACCCGTGACTGTAAATTTCCAGCAAGGACTTGGCCAGAAGTTTAAACAGCCAGCTGGAACTGGTATTTATTTTTCAACATTTGAGGAGTCTGAGTTATTGAAAGTAGGGGACATGGATGTCTATCCTGTTGCAATTAAAGCAGATGCATCCTCTAGCGACCATGATGAATCAAAATCAAATGAAACTCCATCATCCGGTAGCTCAAACTCTCAGATAACTCAAGCAATGTTTGAGAAGGAGAAAGGACAATTCTAG 276 0.3986 MKENVLPPVTVNFQQGLGQKFKQPAGTGIYFSTFEESELLKVGDMDVYPVAIKADASSSDHDESKSNETPSSGSSNSQITQAMFEKEKGQF 91
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma01g01154 91 PANTHER E3 UBIQUITIN-PROTEIN LIGASE 1 91 - -
Gma01g01154 91 PANTHER MAHOGUNIN 1 91 IPR045194 GO:0061630
Gma01g01154 91 MobiDBLite consensus disorder prediction 55 91 - -
Gma01g01154 91 MobiDBLite consensus disorder prediction 68 85 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma01g01154 Gma-Chr1 40996002 40996277 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma01g01154 2 91 C3H Transcription Factor Family AT3G09770 51.648 2.87e-26 97.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma01g01154 - - gmx:100789032 171.4