Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma01g01147 aTGCAATTCAAGAACCGAGTAGCTGAGTTGAGTGGTCATGATCTTAAATATTTGATGCACAAGAGACTCTTCTGGTCAGACCTGAAGCCGAACAACAATCGTCTCTCCATGCCCATAAATGAAATTATGTGTGAATTTCTCACACAAGCTGAGATTGAAAAATTGGATGAAAGAAATGGAAGGAACGGAAAAGGACGGCTCGTTGGTCTGGAATTGACTGTGTTAGACCCATGTCTGAGAGAATTTACTTTACCATTGAAGAAGTGGAGCATGCAAAGGACTGACACCTATAACCTGGTAACAGATTGGAATAGTATCGTATCTACTAATGAGTTTGAAGAAGGTCAAGAGCTCCAAATTTGGTCTTTTAGGGTTGATAACAAGTTATATCTTATCCTAAACAAACTGTGA 411 0.3917 MQFKNRVAELSGHDLKYLMHKRLFWSDLKPNNNRLSMPINEIMCEFLTQAEIEKLDERNGRNGKGRLVGLELTVLDPCLREFTLPLKKWSMQRTDTYNLVTDWNSIVSTNEFEEGQELQIWSFRVDNKLYLILNKL 136
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma01g01147 136 Gene3D - 9 135 IPR015300 -
Gma01g01147 136 PANTHER DUF313 DOMAIN PROTEIN 1 134 - -
Gma01g01147 136 PANTHER B3 DOMAIN PLANT PROTEIN-RELATED 1 134 IPR005508 GO:0003677
Gma01g01147 136 SUPERFAMILY DNA-binding pseudobarrel domain 18 133 IPR015300 -
Gma01g01147 136 Pfam B3 domain-containing protein At2g31720-like 13 108 IPR005508 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma01g01147 Gma-Chr1 40541558 40541968 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma01g01147 9 135 B3 DNA Binding Superfamily AT1G05930 22.656 1.07e-06 44.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma01g01147 - - gmx:102669231 277.715