Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma01g01145 ATGCAATTCAAGAACCGAGTAGCTGAGTTGAGTGGTCATGATCTTAAATATTTGATGCACAAGAGACTCTTCTGGTCAGACGTGAAGCCGAACAACAATCGTCTCTCCATGCCCATAAATGAAATTATGTGTGAATTTCTCACACAAGCGGAGATTGAAAAATTGGATGAAAGAAATGGAAGCAACCGAAAAGGACGGCTCGTTGGTCTGGAATTGACTGTGTTAGACCCATGTCTGAGAGAATTTACTTTACCATTGAAGAAGTGGAGCATGCAAAGGACTGACACCTACAACCTGGTAACAGATTGGAATAGTATCGTATCTACTAATGAGTTTGAAGAAGGCCAAGAGCTCCAAATTTGGTCTTTTAGGGTTGATAACAAGTTATATCTTCTCCTAAACAAACTGTGA 411 0.4015 MQFKNRVAELSGHDLKYLMHKRLFWSDVKPNNNRLSMPINEIMCEFLTQAEIEKLDERNGSNRKGRLVGLELTVLDPCLREFTLPLKKWSMQRTDTYNLVTDWNSIVSTNEFEEGQELQIWSFRVDNKLYLLLNKL 136
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma01g01145 136 Pfam B3 domain-containing protein At2g31720-like 13 108 IPR005508 GO:0003677
Gma01g01145 136 Gene3D - 9 135 IPR015300 -
Gma01g01145 136 PANTHER B3 DOMAIN PLANT PROTEIN-RELATED 1 134 IPR005508 GO:0003677
Gma01g01145 136 SUPERFAMILY DNA-binding pseudobarrel domain 18 131 IPR015300 -
Gma01g01145 136 PANTHER DUF313 DOMAIN PROTEIN 1 134 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma01g01145 Gma-Chr1 40515417 40515827 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma01g01145 9 135 B3 DNA Binding Superfamily AT1G05930 24.806 5.34e-07 45.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma01g01145 - - gmx:102669231 278.485