Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma01g01129 ATGCCTTCTTCTTCCACCACCATAGTCTCCAAATGCGTGATCCACCCCGACCAGAAATCAAACATGAAACCCTTGAGACTCTCTGTTTCTGACCTTCCAATGTTGTCGTGTCACTACATCCAAAAGGGCGTGTTACTAACCGCTCCGCCCTCGTCTTTCGAGGATATGATACTCTCTTTTAAACACTCTCTTTCTATCGCGCTCTCTCACTTTCCGGCTCTTGCGGGAAGGTTAGAGACAGATTCTCATGGTTATGTTAATATTGTCTGTAACGACGCTGGCGTGGATTTTATCCATGCTAAAGCAAAACACCTGACTCTGAACGCCGTCGTTTCACCGTCTCTCGTTGATGTTCACCCTTGCTTCAAGGAGGAGTTTTTCGCTTACGACATGACAATCTCCTACGCCGGCCACAACACCCCCCTCGCCGCCGTCCAGGTGACGGAACTCGCCGACGGCGTCTTCGTCGGCTGCACCGTCAACCACTCCGTCACCGACGGCACCTCGTTCTGGCACTTCTTCAACACGTTCGCCGCCGTCACCAAAGGCGGGTCCGCCAAGAAACTCCTCCGCGCGCCGGACTTCACGAGGGAAACCGTCTTCAACTCCGCCGCCGTCCTCCCCGTCCCCTCCGGCGGCCCCACCGTCACCTTCGACGCCAACGAGCCTCTCCGGGAACGCGTCTTCCACTTCTCCCGCGAAGCCATTCAGAAACTCAAACAACGAGCCAACAACACTGTCAACAACAAGGAACTAACGGAAGTTATGGGAAAACATGTAAATGACGGTTGGAAAGTCGTTAACGGTAACGGTAACTGTAACGGAATGATTAACGGTAACGGAAGAAACGAGATCTCGTCGTTTCAGTCGTTATCTGCTCAGCTCTGGAGAGCGGTGACACGTGCGAGGAAATTCAACGACCCGGCCAAAACGTCGACGTTTCGGATGGCGGTGAATTGCCGCCACCGTCTGGAGCCGAAGATGGACGCGTTCTACTTCGGCAATGCGATTCAGAGCATCCCGACGGTCGCGACCGTCGGAGACATTCTCTCGCGCGATCTGCGCTTCTGCGCAGATCTTCTGCACCGTAACGTCGTCGCTCATGATGACGCTACGGTGCGCCGCGGAATTGAGGACTGGGAGAGTGCGCCAAGGCTGTTTCCTCTCGGAAACTTTGACGGCGCGATGATCACCATGGGAAGCTCTCCGCGGTTTCCCATGTACGAAAACGACTTCGGCTGGGGCAGACCCGTTGCGATTCGGAGTGGGAAAGCGAACAAGTTCGACGGAAAGATCTCCGCGTTTCCGGGGAGAGAGGGAAACGGCAGCGTCGATTTGGAGGTCGTTTTGGCCCCGGCGACCATGGCGGGGCTCGAAAACGACATGGAGTTTATGCAATACGTAACGCAATTCGTTTGA 1419 0.5497 MPSSSTTIVSKCVIHPDQKSNMKPLRLSVSDLPMLSCHYIQKGVLLTAPPSSFEDMILSFKHSLSIALSHFPALAGRLETDSHGYVNIVCNDAGVDFIHAKAKHLTLNAVVSPSLVDVHPCFKEEFFAYDMTISYAGHNTPLAAVQVTELADGVFVGCTVNHSVTDGTSFWHFFNTFAAVTKGGSAKKLLRAPDFTRETVFNSAAVLPVPSGGPTVTFDANEPLRERVFHFSREAIQKLKQRANNTVNNKELTEVMGKHVNDGWKVVNGNGNCNGMINGNGRNEISSFQSLSAQLWRAVTRARKFNDPAKTSTFRMAVNCRHRLEPKMDAFYFGNAIQSIPTVATVGDILSRDLRFCADLLHRNVVAHDDATVRRGIEDWESAPRLFPLGNFDGAMITMGSSPRFPMYENDFGWGRPVAIRSGKANKFDGKISAFPGREGNGSVDLEVVLAPATMAGLENDMEFMQYVTQFV 472
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma01g01129 472 PANTHER ANTHOCYANIN 5-AROMATIC ACYLTRANSFERASE 5 469 - -
Gma01g01129 472 SUPERFAMILY CoA-dependent acyltransferases 60 183 - -
Gma01g01129 472 Gene3D - 6 208 IPR023213 -
Gma01g01129 472 Pfam Transferase family 6 465 - -
Gma01g01129 472 Gene3D - 222 465 IPR023213 -
Gma01g01129 472 PANTHER FAMILY REGULATORY PROTEIN, PUTATIVE (AFU_ORTHOLOGUE AFUA_3G14730)-RELATED 5 469 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma01g01129 Gma-Chr1 40140651 40142668 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma01g01129 61 460 Monolignol Biosynthesis Gene Families AT5G48930 26.585 4.66e-33 128
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma01g01129 - - gmx:100780358 938.717
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma01g01129 01 40140651 40142668 Gma01g01129 01 40140651 40142668 ECH