Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Gma01g01122 ATGTCTTCCTCCCGTTATGACTCCGATCTCCATGATGACTTTTTCCGTGAATGGTACCAGGACGACAATAGAAagtatgatgtgtttatgagtttcagaggaaaagacacgcgtgcttctttcacttcacatctctatgccgctcttaagaatgcaggaatcactgttttcaaggatgatgagacactttcaaggggaaaacacatctcacactcgctgcggctgggaatagaacagtctcgaatttctgttgttgttttctcgagaaattacgcagagtcgcggtggtgtttgcaagagttggagaaaataatggagtgtcacagaacaacagggcaggtagtactacctgtgttctatgatgttgatccctctcaggtacgtcatcaaaaaggccactttgggaaagcatttgaaaagcttCTGAATACGATTTTAAAAGAGATAGGAGATAAGTGGCCGCAAGTTGTGGGATGGAGGGAGGCACTTCACAAAGCGACTCATAACCAAAGGTGTTGGAAAAACTCGCACGTTAACCTTTGGAGGAAGGGACTTTGTGAGGCTGGTGGCGTCCCAGTGGTTGTTGTCTTCAGCTCCAGTGGAGAAACGGAGATTGCTAATGAGATAAGCCTCATCCTTAAGCATTGGAGGGAGGCACTATGTAAGGCTGCTGGCATCGTTTTAAATTGCAGTCCGCAACCGCAACTACGGTCCCAACATAACGGTTATTTGACTGTTTGCAACTGCATCAAGACAGCAGTTACAGTCGCATCCGCTGCATTTTCCTGCAATTGCTCACCACAATATAAAGATTGTTTGACTCGCCGCAACCACCATTCACCGCCAGAAATGTCTGCAACCATCTCAGGCAGTGCAGTCTTAAATTCCAGTGTTGAAATGGAGATGGCTAATAATGAGATAGACGACCTCATCCAGAGTTGGAAGGATGCACTTCATAAGGCTGCTGGCATCTCAGGGGTTGCAGTCTTAAATCACCGAGGAGAAATGGACACTTCTAATGAGATAAACCAATTCGTGAAGCGTTGGACGGAGGCCCTTCGTGAGGCTGCTAGCATCTCAGGGGTTGTAGTCCAAAATTTCAAgaatgaaagtgaggctatcaaacatattgttgaaaatgttacccatttgttagacaagacagagttgtttgttgccaataatccagtgggagtagaacatcgagtgcaagaaatgattcagttgctagaccaaaaacaatcaaatgatgttttactactagggatgtgggggatgggaggcattggtaaaacaacaattgcaaaagccatttacaataggattggccgcaattttgatggaaggagtttccttgcacatattagggaagattgggggcaagactctggtcaagtgtatttacaagaacaacttctttttgatattgacaaagaaacaaatgcaaagatacgtaacgttgaatcaggaaaaattatattaaaggaaagacttcgtcataagagggtattgcttatacttgatgatgtgaatgaactagaccaaatgaatattttgtgcggaagccatgaatggtttggtccagggagtagaataatcatcacaaccagagatattagtatacttagaaggggaggagttgacaaagtgtacaaaatgaaaggaatgaatgaagttgaatcaattgagcttttttgttggcatgcattcaagcaagccagtcctagagaagattttatcgacctttctagaaatgtagttgtatattctgggggattgccactagctcttgaagtccttgggtcctatttgtttgatatgaaagtaacagaatgggaaagtgtattagagaaactcaagagaattcctaatgatcaagtacaaaaaaagttaaaaataagctattatggtttaagtgatgatacagagagggaaatattccttgatatagcttgtttctttattggaatggatcgatttgatgttatacgcatattaaatggttgtggacttttcgcagaaattggaatatttgtccttgtagagagaagcctcgtatctgttgatgataagaacaagcttggaatgcatgatttattacgagacatgggaagagaaattattcgtgaaaagtcgccaaaggagcttgaggagcgtagcaggttatggtttcgtgacgatgtgcttgatgtattatcaaaagaaactggaacaaaagctattgagggactagctttgaagttaccaaaagctaatacagaaaaagttcgcaccaaagcttttaagaagatgaagaaactcaggctgcttcaacttgctggtgttgaacttgttggagattttgaatacatttccaaagatcttagatggctttgttggcatggatttcctttgacatgcataccaagaaacttttatcaaggaagtctagtttCCATTCAGTTAGAAAACAGTAACATTACAATTTTGTGGAAAGAGGCACAGttgatggagaagctgaaaattcttattcttagccattctcattacttaacacacactccagacttttcgaatttgcctaatcttgaaaaactagaactcatagattgtccaaggttgtgtgaggtttccgataccattgtacatctcaataaagttcttctaataagttttcaagattgtatcagacttcgaaaacttccaagaagtatctataagttgaaatctcttaaaacactcattctttctggatgtttaaagattgacaagttggaagaagatttggaacaaatggaatctttaacaacccttgtggctgataagactgcaataacaagagtgccagtttcaattgttagatcaaaaagcattggatatatttctctgtgtggctatgaaggattgtcacatgatgtgtttccttccatcatttggtcttggatgtcaccaatgaacagtctctcttctcgcaatcaaacatttacgggcatatcatctcttgtttcactagatgtgccaaatacaagttccaatcatttatcatatatttccaaagaccttccaaagcttcaaagtctttgggtagagtgtggctcagaacttcaactttctcgagatgtaacaagtattttggatgctttatatgccacacattctgaaaaattggaatcaactacatcacaaatgtataatatgaaatgcaacaatgtagtttccaattcaggatcaaattccttgagatcacttttatttcaaataggaatgagttgtgaaatcacccatattctgagacaaagaattttacagaatatgactactagtg 3304 0.1126 MSSSRYDSDLHDDFFREWYQDDNRKYDVFMSFRGKDTRASFTSHLYAALKNAGITVFKDDETLSRGKHISHSLRLGIEQSRISVVVFSRNYAESRWCLQELEKIMECHRTTGQVVLPVFYDVDPSQVRHQKGHFGKAFEKLLNTILKEIGDKWPQVVGWREALHKATHNQRCWKNSHVNLWRKGLCEAGGVPVVVVFSSSGETEIANEISLILKHWREALCKAAGIVLNCSPQPQLRSQHNGYLTVCNCIKTAVTVASAAFSCNCSPQYKDCLTRRNHHSPPEMSATISGSAVLNSSVEMEMANNEIDDLIQSWKDALHKAAGISGVAVLNHRGEMDTSNEINQFVKRWTEALREAASISGVVVQNFKNESEAIKHIVENVTHLLDKTELFVANNPVGVEHRVQEMIQLLDQKQSNDVLLLGMWGMGGIGKTTIAKAIYNRIGRNFDGRSFLAHIREDWGQDSGQVYLQEQLLFDIDKETNAKIRNVESGKIILKERLRHKRVLLILDDVNELDQMNILCGSHEWFGPGSRIIITTRDISILRRGGVDKVYKMKGMNEVESIELFCWHAFKQASPREDFIDLSRNVVVYSGGLPLALEVLGSYLFDMKVTEWESVLEKLKRIPNDQVQKKLKISYYGLSDDTEREIFLDIACFFIGMDRFDVIRILNGCGLFAEIGIFVLVERSLVSVDDKNKLGMHDLLRDMGREIIREKSPKELEERSRLWFRDDVLDVLSKETGTKAIEGLALKLPKANTEKVRTKAFKKMKKLRLLQLAGVELVGDFEYISKDLRWLCWHGFPLTCIPRNFYQGSLVSIQLENSNITILWKEAQLMEKLKILILSHSHYLTHTPDFSNLPNLEKLELIDCPRLCEVSDTIVHLNKVLLISFQDCIRLRKLPRSIYKLKSLKTLILSGCLKIDKLEEDLEQMESLTTLVADKTAITRVPVSIVRSKSIGYISLCGYEGLSHDVFPSIIWSWMSPMNSLSSRNQTFTGISSLVSLDVPNTSSNHLSYISKDLPKLQSLWVECGSELQLSRDVTSILDALYATHSEKLESTTSQMYNMKCNNVVSNSGSNSLRSLLFQIGMSCEITHILRQRILQNMTTS 1101
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Gma01g01122 1101 Gene3D - 555 639 IPR042197 -
Gma01g01122 1101 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 383 650 IPR027417 -
Gma01g01122 1101 CDD AAA 397 544 - -
Gma01g01122 1101 Gene3D Ribonuclease Inhibitor 745 1083 IPR032675 -
Gma01g01122 1101 SMART till_3 25 169 IPR000157 GO:0007165
Gma01g01122 1101 PRINTS Disease resistance protein signature 497 511 - -
Gma01g01122 1101 PRINTS Disease resistance protein signature 420 435 - -
Gma01g01122 1101 PRINTS Disease resistance protein signature 899 915 - -
Gma01g01122 1101 PRINTS Disease resistance protein signature 590 604 - -
Gma01g01122 1101 Gene3D - 383 546 IPR027417 -
Gma01g01122 1101 Gene3D - 20 215 IPR035897 -
Gma01g01122 1101 SUPERFAMILY "Winged helix" DNA-binding domain 626 732 IPR036390 -
Gma01g01122 1101 Gene3D - 335 382 IPR035897 -
Gma01g01122 1101 PANTHER RCT1-LIKE RESISTANCE PROTEIN, PUTATIVE-RELATED 32 1099 - -
Gma01g01122 1101 SUPERFAMILY L domain-like 746 1051 - -
Gma01g01122 1101 SUPERFAMILY Toll/Interleukin receptor TIR domain 18 164 IPR035897 -
Gma01g01122 1101 Pfam NB-ARC domain 400 628 IPR002182 GO:0043531
Gma01g01122 1101 Pfam TIR domain 25 174 IPR000157 GO:0007165
Gma01g01122 1101 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 32 1099 IPR044974 GO:0006952
Gma01g01122 1101 ProSiteProfiles TIR domain profile. 24 180 IPR000157 GO:0007165
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Gma01g01122 Gma-Chr1 39569384 39578741 Transposed
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma01g01122 347 945 WRKY Transcription Factor Family AT4G12020 33.008 1.49e-77 278
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma01g01122 - - gmx:100808685 2175.21