Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma01g01112 ATGATAGTTTCTATGGACTTGAATGCCTCGCCAGTTCCAGAGGAAGATGAAGATATCTTTGAGGAGAAGATACATGTTGAAGAGTTTCATGAACCTGAAGAACGCATAGAAACTGGAGCTGATATAGCACGCCGGGAGCGTGAAGAAAGAAAGAGACGGTTGAAGAGAGAACGACCGGATGATAGACCTGTACATGTGTCACAATCACCTGGATATGATCAGCTATTTCATACCAAGAATCAAAGATCATATGATAAAAGCAGGCTTCCTCCTGGGTGGTTGGATTGCCCTTCATCTGGCCAGGAAATTTGTTGCATGATACCTTCTAAGGTTCCACTTGGTGAATCGTTCAATGACTGCATTCCTCCTGGTAAAAGATACTCATTTAAACAAGTGATACATCAACAGAGAGTTTTAGGGAGAAAACTTGGTCTGGTGATTGATTTGACAAATACCACTCGATACTATCCTGTGTCAGATTTAAAAAAAGAGTGCATCAAGCATGTTAAGATTCAATGCAGGGGGCGAGATTCTGTACCTGATAATTTATCTGTGAACCAGTTTGTCTATGAGGTTACACAATTTTTGTCACGTCAAAAGCACTCAAAAAAGTATATACTTGTTCATTGTACACATGGGCATAATCGTACAGGATACATGATCATCCACTATCTAATGCGTGCTATGTCAATGTCTGTTACTCAGGCAATAAAAATATTTTCTGAAGCTCGCCCTCCAGGAATCTACAAACCTGATTACATTGATGCATTGTACTCATTTTATCATGAGAAAAAACCTGAAATGGTAGTTTGTCCTCCTACTCCGGAGTGGAAGAGATCTTCTGAATTTGATCTCAATGGTGAAGCTGTTCCAGATGATGATGATGATGGAGTACCAGGCCCTGATTTGCACGAGAACCATGAGACAGACACACGAATGACAAATGATGATGTTTTAGGAGATGAGATACCTACTGATCAGCAGGATGCATTGCGTCAGTTCTGTTATCAAACGCTTAAATTGGGTGTTGGGGCCAGGGGACACACACAATTTCCAGGTTCACACCCAGTTTCTCTCAACAGGGATAATTTGCAATTGTTACGACAACGCTATTATTATGCAACATGGAAAGCAGATGGTACAAGATATATGATGCTAATAACAATGGATGGATGTTACTTGATTGATAGAAGTTTTAATTTTCGAAGGGTCCAAATGAGGTTTCCTTGCAGAAGTACAAATGATGGTTTGGGCGAGAAGACCCACCACTTCACATTACTTGATGGTGAGATGGTTATTGATACATTGCCAGATTCACAGAAGCAGGAGAGAAGATACCTTATATATGATCTGATGGCAATCAACCAAGTATCAGTAATAGAGCGTCCCTTCTATGAACGGTGGAAGATGCTTGAGAAAGAAGTGATTGAACCTAGGAATCACGAACGACACCATATATATCAGAGCAGAAATCCTTACTATAGATATGATCTGGAACCATTCAGGGCATGGATCTCTAACCTTAATTGGAGGAAAGACTTTTGGTTGCTCTCTACTGTCACAAAGCTTTTAAAGGAATTCATTAAAAGACTCTCACATGAGGCAGATGGTCTCATATTTCAGGGTTGGGATGATCCTTATATACCTCGTACTCATGAAGGACTATTGAAGTGGAAATATGCTTATCTGAATTCAGTTGATTTTCTTTTCGAGGTAGTTGATGGTGATCGTGAGCTACTTTTTCTCTATGAACGGGGAAAGAAGAAACTCTTGGAAGGGAATAGGGTTGAATTCACAGATGGTTCAGATCCCTCACTTTATTCTGGAAAGATAATTGAATGTTCTTGGGATTTTGACAAACTGGAATGGAAGTTTATGCGAATCAGAACAGACAAATCAACTCCGAATGAGTTTAATACTTACAGGAAGGTCATGCGAAGCATAAGAGACAACATCACCGAGGAAGATTTGTTGAATGAAATAAGTGAGATAATTCGCCTTCCCATGTATGCTGACAGGATCAGAATTGATAGTAAAGCGAATCAGCATGCTAATGTCGCAAGGCGAAGGCAAGGGAAAGCTGAATCTGAAACTTCAGAAGCAGCACAATTGTATTCCAGATGA 2124 0.4007 MIVSMDLNASPVPEEDEDIFEEKIHVEEFHEPEERIETGADIARREREERKRRLKRERPDDRPVHVSQSPGYDQLFHTKNQRSYDKSRLPPGWLDCPSSGQEICCMIPSKVPLGESFNDCIPPGKRYSFKQVIHQQRVLGRKLGLVIDLTNTTRYYPVSDLKKECIKHVKIQCRGRDSVPDNLSVNQFVYEVTQFLSRQKHSKKYILVHCTHGHNRTGYMIIHYLMRAMSMSVTQAIKIFSEARPPGIYKPDYIDALYSFYHEKKPEMVVCPPTPEWKRSSEFDLNGEAVPDDDDDGVPGPDLHENHETDTRMTNDDVLGDEIPTDQQDALRQFCYQTLKLGVGARGHTQFPGSHPVSLNRDNLQLLRQRYYYATWKADGTRYMMLITMDGCYLIDRSFNFRRVQMRFPCRSTNDGLGEKTHHFTLLDGEMVIDTLPDSQKQERRYLIYDLMAINQVSVIERPFYERWKMLEKEVIEPRNHERHHIYQSRNPYYRYDLEPFRAWISNLNWRKDFWLLSTVTKLLKEFIKRLSHEADGLIFQGWDDPYIPRTHEGLLKWKYAYLNSVDFLFEVVDGDRELLFLYERGKKKLLEGNRVEFTDGSDPSLYSGKIIECSWDFDKLEWKFMRIRTDKSTPNEFNTYRKVMRSIRDNITEEDLLNEISEIIRLPMYADRIRIDSKANQHANVARRRQGKAESETSEAAQLYSR 707
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma01g01112 707 PIRSF mRNA_capping_HCE 75 694 IPR017074 GO:0004484|GO:0006370|GO:0140818
Gma01g01112 707 ProSiteProfiles Dual specificity protein phosphatase domain profile. 116 267 IPR020422 GO:0006470|GO:0008138
Gma01g01112 707 CDD RNA_5'-triphosphatase 92 258 - -
Gma01g01112 707 ProSitePatterns Tyrosine specific protein phosphatases active site. 208 218 IPR016130 GO:0016311|GO:0016791
Gma01g01112 707 Pfam mRNA capping enzyme, catalytic domain 355 559 IPR001339 GO:0004484|GO:0005524|GO:0006370
Gma01g01112 707 Gene3D DNA ligase/mRNA capping enzyme 314 559 - -
Gma01g01112 707 CDD Adenylation_mRNA_capping 326 560 IPR001339 GO:0004484|GO:0005524|GO:0006370
Gma01g01112 707 MobiDBLite consensus disorder prediction 682 707 - -
Gma01g01112 707 MobiDBLite consensus disorder prediction 30 84 - -
Gma01g01112 707 SMART dsp_5 123 263 IPR020422 GO:0006470|GO:0008138
Gma01g01112 707 Pfam mRNA capping enzyme, C-terminal domain 564 658 IPR013846 -
Gma01g01112 707 PANTHER MRNA-CAPPING ENZYME 3 690 - -
Gma01g01112 707 MobiDBLite consensus disorder prediction 300 317 - -
Gma01g01112 707 MobiDBLite consensus disorder prediction 682 696 - -
Gma01g01112 707 Pfam Dual specificity phosphatase, catalytic domain 141 261 IPR000340 GO:0008138|GO:0016311
Gma01g01112 707 SUPERFAMILY Nucleic acid-binding proteins 563 674 IPR012340 -
Gma01g01112 707 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 89 278 IPR029021 -
Gma01g01112 707 MobiDBLite consensus disorder prediction 285 317 - -
Gma01g01112 707 MobiDBLite consensus disorder prediction 30 64 - -
Gma01g01112 707 Gene3D Protein tyrosine phosphatase superfamily 65 284 IPR029021 -
Gma01g01112 707 Gene3D - 595 667 IPR012340 -
Gma01g01112 707 PANTHER MRNA (GUANINE-N(7)-)-METHYLTRANSFERASE-RELATED 3 690 - -
Gma01g01112 707 ProSiteProfiles Tyrosine specific protein phosphatases domain profile. 186 255 IPR000387 GO:0016311|GO:0016791
Gma01g01112 707 SUPERFAMILY DNA ligase/mRNA capping enzyme, catalytic domain 316 560 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma01g01112 Gma-Chr1 39196308 39216911 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma01g01112 1 690 Protein tyrosine phosphatase (PTP) family AT3G09100 68.058 0.0 942
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma01g01112 K13917 - gmx:100776633 1366.67
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma01g01112 01 39196308 39216911 Gma01g01112 01 39196308 39216911 ECH