Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma01g01071 ATGGGTAAAAGAATTGGAGAAGATGATAATTATCATGTAAGGGTTTCTGCCATGAAGATGAAGAAAATGAAAGCAATTGTGATGATGACGGAGGCAAGGTTTTGCTTCAAGACTATGAGTGATGTAGATGTCTTGGATGATGGCTACAAGTGGAGGAAGCTAAGTGGCTCTGTCAGACTGGGCTTGTTGTGTTACTTCCTCATTGTTATGATGGCTAGAGCCCAGAGCATTGAAGTGCAAGATTGGAACGCTTTCTTCAGACGTTTAGTACTTTGCTCTGGAAAGGTTTACTATGAACTTGATGAACAACGAACAAAGGTTGATGAAAATGATGTTGCAATATATGCTGAGGTTGTTTGGTGTCAAGAAGAGCCAATGAACATGGGTGGATCTTATGTTTTACCCCGACTTATATCTTCAATGAAAGCTGTGAATAGGAAAGGTTATGACGATGTCAAATATATTGGTGGTGCTCCATTCGCGGCCACAACCACTGGTTTCCTTAAGATTCACCAAAAGTAG 522 0.4061 MGKRIGEDDNYHVRVSAMKMKKMKAIVMMTEARFCFKTMSDVDVLDDGYKWRKLSGSVRLGLLCYFLIVMMARAQSIEVQDWNAFFRRLVLCSGKVYYELDEQRTKVDENDVAIYAEVVWCQEEPMNMGGSYVLPRLISSMKAVNRKGYDDVKYIGGAPFAATTTGFLKIHQK 173
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma01g01071 173 PANTHER 2-OXOGLUTARATE DEHYDROGENASE 79 114 IPR011603 GO:0004591|GO:0006099|GO:0030976
Gma01g01071 173 Gene3D - 117 173 IPR042179 -
Gma01g01071 173 Gene3D - 66 116 IPR042179 -
Gma01g01071 173 PANTHER 2-OXOGLUTARATE DEHYDROGENASE 116 173 IPR011603 GO:0004591|GO:0006099|GO:0030976
Gma01g01071 173 Pfam 2-oxoglutarate dehydrogenase C-terminal 116 173 IPR031717 -
Gma01g01071 173 Pfam 2-oxoglutarate dehydrogenase C-terminal 85 114 IPR031717 -
Gma01g01071 173 PANTHER E1 SUBUNIT-LIKE 2-OXOGLUTARATE DEHYDROGENASE 79 114 - -
Gma01g01071 173 PANTHER E1 SUBUNIT-LIKE 2-OXOGLUTARATE DEHYDROGENASE 116 173 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma01g01071 Gma-Chr1 38426873 38431796 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma01g01071 15 53 WRKY Transcription Factor Family AT4G39410 66.667 1.37e-12 62.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma01g01071 K00164 - gmx:100786978 145.591