Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma01g01069 ATGGGGGCTCGTTGCTCTAAATTCTCTTTCTGCTGGTTCCACTCTCACCTCAAACCTTCTGTCCTTGAATCCTCTGACCAAGAAAATGGTGAGAAGGGTGAGAGAAAATTGTGGCCAAGTTTTGGTGAGTTCAGTTTGGAGCAACTGAAGGCTGCCACAAATGGGTTCTCCTCAGAAAACATAGTATCTGAGCATGGTGAGAAAGCTCCCAATGTTGTTTACAAAGGAAAACTTGATAATGGACAGTGGATCGCCATCAACGTTTCAACAAATTTGCTTGGCCTGATTCTCGCCAATTCCTCGTTTGCACAGCCAATGAAATGGGCCATGAGGTTGAGGGTGGCTTTCTACTTAGCTCAAGCTCTAGAATATTGCACTAGTAAAGGAAGGGGTTTGTATCATGATCTCAATGCCTACAGAATCTTGTTTGATCAGGATGCTAATCCCAGGTTGTCTTGCTTTGGACTCATGAAGAAGAGCAGAGATGGCAAGAGTTACAGCACAAACCTGGCTTTCACCCCTCCTGAGTACTTAAGGACTGGCAAAATTTTTAGGATAGTGACTCCACAGAGTGTGGTTTACAGTTTTGGAACTCTGCTGCTAGATCTCTTGAGTGGTAAACATATTCCACCAAGCCTTGCACTTGACCTGATTCGTGGCAAAAACTTTTTGATGTTGATGGATTCTGCCTTAGAGGGTCACTTTTCAAAGGATGACGGAACTGAGTTGGTTCGTTTGGCTTCTCGTTGTTTACAATATGAAGCTCGTGAGAGGCCAAATGCAAAGTCTCTTGTTGCATCTCTCATGTCACTTCAGAATGAAACAGAGGTCCCCTCATATGTTCTAATGGAGAAGACTGGTTACAAGGATGATGAAGGAATTGCCAATGAGCTTTCCTTTCAATTGTGGACCAGCCAAATGCAGGAGACCTTGAATTTGAAGAAGCATGGAGATACTGCTTTTAGAGCTAAGGACTTTATCACTGCCATTGACTGCTACACTCAATTCATAGATGGAGGGACCATGGTGTCACCCACAGTGTATGCAATACGCTGCTTATCTTTATTGATGAATGACATGGCACAAGAAGCTCTTGGGGATGCAATGCAAGCCCAAGTGGTATCTCCAGAGTGGCCTACTGCTTTGTATCTTCATGCAGCTTGTCTTTTCAGCCTCGGAATGGAAAATGATGCACAAGAGACTCTCAAAGATGGGACTAACATGGAAGGCAGAAAAAACAAAAACTGA 1248 0.4383 MGARCSKFSFCWFHSHLKPSVLESSDQENGEKGERKLWPSFGEFSLEQLKAATNGFSSENIVSEHGEKAPNVVYKGKLDNGQWIAINVSTNLLGLILANSSFAQPMKWAMRLRVAFYLAQALEYCTSKGRGLYHDLNAYRILFDQDANPRLSCFGLMKKSRDGKSYSTNLAFTPPEYLRTGKIFRIVTPQSVVYSFGTLLLDLLSGKHIPPSLALDLIRGKNFLMLMDSALEGHFSKDDGTELVRLASRCLQYEARERPNAKSLVASLMSLQNETEVPSYVLMEKTGYKDDEGIANELSFQLWTSQMQETLNLKKHGDTAFRAKDFITAIDCYTQFIDGGTMVSPTVYAIRCLSLLMNDMAQEALGDAMQAQVVSPEWPTALYLHAACLFSLGMENDAQETLKDGTNMEGRKNKN 415
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma01g01069 415 Gene3D Transferase(Phosphotransferase) domain 1 91 285 - -
Gma01g01069 415 Gene3D Tetratricopeptide repeat domain 307 415 IPR011990 GO:0005515
Gma01g01069 415 Pfam Protein tyrosine and serine/threonine kinase 104 268 IPR001245 GO:0004672|GO:0006468
Gma01g01069 415 PANTHER SERINE/THREONINE-PROTEIN KINASE BSK5 283 415 IPR045845 GO:0004672|GO:0009742
Gma01g01069 415 PANTHER SERINE/THREONINE-PROTEIN KINASE BSK5 1 283 IPR045845 GO:0004672|GO:0009742
Gma01g01069 415 SUPERFAMILY Protein kinase-like (PK-like) 40 279 IPR011009 -
Gma01g01069 415 SUPERFAMILY TPR-like 311 404 IPR011990 GO:0005515
Gma01g01069 415 PANTHER SERINE/THREONINE-PROTEIN KINASE BSK6 283 415 - -
Gma01g01069 415 PANTHER SERINE/THREONINE-PROTEIN KINASE BSK6 1 283 - -
Gma01g01069 415 ProSiteProfiles Protein kinase domain profile. 1 271 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma01g01069 Gma-Chr1 38343337 38348247 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma01g01069 44 271 Receptor kinase-like Gene Family AT3G58690 28.289 3.51e-21 92.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-XII-1 Gma01g01069 PK_Tyr_Ser-Thr 2.8e-11 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma01g01069 - - gmx:100814477 731.865
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma01g01069 01 38343337 38348247 Gma01g01069 01 38343337 38348247 ECH