Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma01g01037 ATGGAAGCTTCATCACCTCACTCTCTCACCATGCAGAACCCCTCTGCTTACCTGTCATGCTTTCTTATCCTCTTGATCATTCTTTTCCCAACCCACGCACGTGCCGACCTCCCCGGCACGTGGGAGCTTCTCGTCCCGGACGCCGGCATCGCCTCCATGCACACCGCCGTCACGCGGTTCAACACGGTGGTCCTCCTAGACCGCACCAACATAGGCCCGTCCCGAAAACTCCTCCCAAAAGGCCACTGCCGGTCGGACAAAAACGACGCCGTCCTGAAGCTCGACTGCTACGCCCACTCCGTCCACCTCGACCTTGCCACCAACCAAATCCGCCCTTTAAAAATCCTCACCGACACCTGGTGCTCCTCCGGCCAGTTCCTCCCCGACGGCACCCTCCTCCAGACCGGCGGCGACCTCGACGGCCTCAAAAAGATCCGCAAATTCTCCCCGTGCGACGACGCTTCGTGTGATTGGGAAGAGCTCAACGACGTCGTATTGGCCGAGGGCCGATGGTACGCCACCAACCAGATCCTCCCTGACGGTTCTGTCATCATAATCGGCGGACGCGGCTCCAACACTGTCGAATTCTTCCCACCCAAACAAAACGTCGCCGTTTCGTTCCCTTTCTTATCCGAAACGGAAGACACGCAAATGGATAACCTTTACCCCTACGTCCACCTTCTCCCAAACGGTCACCTTTTTGTTTTCGCTAACACAAGATCGGTCATGTACGATTTCAACCGCCACGTCATCGTTAAGGAATACCCTAAATTACAAGGTGGCCCGAGAAACTACCCTTCCGCAGGGTCATCAGCGATGTTAGCTTTAGAAGGAGACTATTCTAAAGCTGAGATTGTGGTTTGTGGGGGTGCACAATACGGAGCGTTTTTGATGCGGAGTACTGACACCCCGGCGCACGGTAGCTGCGGCCGCATTTTAGCGATGGAAGAGAAACCCAGATGGGTAATGGAAGACATGCCGTTTGGGAGGATTATGGGGGATATGGTGATGCTGCCAAACGGCGACGTTTTGATTATTAATGGAGCGATGTCGGGGACTCAGGGTTTTGAGATGGCGAGTGATCCGTGTTTGAACCCGGTTCTGTACCGGCCCGACCAACCGGTCGGGTTGCGGTTCATGGTTTTGAACCCCGGGACGGTTCCGAGGATGTACCACGCGACAGCGAATCTGTTACCTGATGCGAGGGTTTTGCTTGCGGGGAGTAACCCCCATGTTCTGTACCGGTTCAATGACGTGGAGTTTCCGACCGAGTTGCGGGTTGAAGCGTTCTCGCCCGAGTATTTGTCTGCGGACCGAGCCAATCTTAGACCGGTTATTGAGGAGGTGCCCGAAACGGTGCGTTTTGGTGGGAAGTTTGATGTGGTGGTTTCGGTTGCTTTGCCTGTGGTGGGGATTGTGGAAGTGAATTTGGCAAGTGCGCCTTTTGCCACGCACTCGTTCTCGCAGGGTCAACGTTTGGTCAAACTGGCTGTTTCCTCTGCTGTGCCTGACGGCGGTGACGGCAGGTATCGAATTGGGGTAACAGCTCCGCCGAGTGGGGCGGTGGCGCCGCCGGGGTACTACATGGCATTTGCGGTGAACCAGGGAGTGCCCAGTGTTGCAAAGTGGATTCACGTGTCATATGAAAAGCGTCATTCAAATATTCCAGCACACATATCACCTTGTTTCCGTGTTAAGGAAGGAGATCATGTTATTATTGGCCAATGCAGGCCAATCTCGAAGACGGTGAGGTTCAATGTGTTGAAAGTGATCCCAGGTGGATCCTCTAGCGGTGCAAAGAAGGGTTTTACTGGAATGTGA 1821 0.5464 MEASSPHSLTMQNPSAYLSCFLILLIILFPTHARADLPGTWELLVPDAGIASMHTAVTRFNTVVLLDRTNIGPSRKLLPKGHCRSDKNDAVLKLDCYAHSVHLDLATNQIRPLKILTDTWCSSGQFLPDGTLLQTGGDLDGLKKIRKFSPCDDASCDWEELNDVVLAEGRWYATNQILPDGSVIIIGGRGSNTVEFFPPKQNVAVSFPFLSETEDTQMDNLYPYVHLLPNGHLFVFANTRSVMYDFNRHVIVKEYPKLQGGPRNYPSAGSSAMLALEGDYSKAEIVVCGGAQYGAFLMRSTDTPAHGSCGRILAMEEKPRWVMEDMPFGRIMGDMVMLPNGDVLIINGAMSGTQGFEMASDPCLNPVLYRPDQPVGLRFMVLNPGTVPRMYHATANLLPDARVLLAGSNPHVLYRFNDVEFPTELRVEAFSPEYLSADRANLRPVIEEVPETVRFGGKFDVVVSVALPVVGIVEVNLASAPFATHSFSQGQRLVKLAVSSAVPDGGDGRYRIGVTAPPSGAVAPPGYYMAFAVNQGVPSVAKWIHVSYEKRHSNIPAHISPCFRVKEGDHVIIGQCRPISKTVRFNVLKVIPGGSSSGAKKGFTGM 606
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma01g01037 606 Gene3D - 36 442 IPR037293 -
Gma01g01037 606 SUPERFAMILY Nucleic acid-binding proteins 548 593 IPR012340 -
Gma01g01037 606 SUPERFAMILY Galactose oxidase, central domain 100 436 IPR011043 -
Gma01g01037 606 Pfam Glyoxal oxidase N-terminus 53 290 IPR009880 -
Gma01g01037 606 PANTHER SECRETED PROTEIN-RELATED 22 546 - -
Gma01g01037 606 CDD E_set_GO_C 440 546 IPR015202 -
Gma01g01037 606 Pfam Galactose oxidase-like, Early set domain 443 546 IPR015202 -
Gma01g01037 606 ProSitePatterns Ribosomal protein S17 signature. 568 580 IPR019979 GO:0003735|GO:0005840|GO:0006412
Gma01g01037 606 Gene3D - 543 606 - -
Gma01g01037 606 Gene3D Immunoglobulins 443 542 IPR013783 -
Gma01g01037 606 Pfam Ribosomal protein S17 548 589 IPR000266 GO:0003735|GO:0005840|GO:0006412
Gma01g01037 606 SUPERFAMILY E set domains 441 546 IPR014756 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma01g01037 Gma-Chr1 36782680 36785952 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma01g01037 548 606 Cytoplasmic Ribosomal Protein Gene Family AT3G48930 86.667 3.46e-31 117
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma01g01037 - - gmx:100816888 1098.19
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma01g01037 01 36782680 36785952 Gma01g01037 01 36782680 36785952 ECH