Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma01g01013 ATGTCGCTAGCTTCTTCCTTTCTAAAAGTTCACCAATACTATCTCACTAAGGCATGGAAAACCCTTGCCTTTCCAACCATCAAACTCACCAACCTCCTTTCCCTCTTCCTCAAAACTAGCCTTGCCCTATGCACTTGCTTTATCATCTCCCTCTTCTTTTACCTCTCTCTCTCTCTCTACCATCATAATTACAACTACTCACCATTTCAACACCCTTACCATTTCATAATCTCACACGATCCATCCACCTTTGAAAACAACAATGAACCAACCAATATTTCCCACATTGTGTTTGGCATGGGTGGTTCTGCCAAGTCTTGGCAGGACCATCGACACTACACCGAAGTCTGGTGGCAGCCGAATGTCACTAGAGGCTTTATGTGGTTGGAACAGGAACCTCTAGTTCTAGCCAAAGAGACGTGGCCGGAGACTTTACCGCCATATAAAGTCTCTGGTGTCACATCATCATTCATGTACACGAATAAGGTAGGGTTGCAATTTGCAATCCACTTGGCACGAATTCTAAAGGAGACTTTCCAGTTAGGGCTAGAAAACGTGAGGTGGTTTGTGATGGGAGACAATGACACTGTATTTTTCACGGAGAACCTAGTCACTGTGCTTGCGAAATACGATCATAATGAAATGTACTATATTGAAGACAACTCAGAGAGCGTGGAACAAAACGTGGCACAAACCTATGGCATGGCTTTTGGTGGTGGTGGGTTTGCCATAAGCTACCCTTTGGCAGAAGTGCTAGTGAAGATTTTGGATGGATGCATTAATCGCTATGCTGTGTTGTTTGGCTCTGATCAAAAGGTTCACGCATGCATGAGTGAGATTGGTGTTCAACTCACCAAAGAGCCTGGTTTTCATCAGACTGACGGGCTTCTCGCGGCGAACCCAATAGCGCCACTTGTGTCACTACACCACCTCCATGCTTCAGAGCCATTGTTTCGAGACACAGGTCGGGTCGAGTCCTTAAAAAGGTTTGTATCCGCATATAAAATGGATCCAGGTCGAATCCTCCAGAAGAGCATATGCTATGACCCGAATCGGAATTGGACATTCTCAGTGTCTTGGGGCTACAATGTGGAGTTGTACCGTTCTTTAGAGACGTCCATTGAGTTGCAAACAACGTTTAAGACTTTTCAAACATGGCGTGGGTATGAGGACCCGTTCACATTCAATACCCGACCCGTTATCCCCGACCAGTGTAAGAGGCCCGTGGTGTTCTTCTTGGATCAGATCGAAGATGGGGGACTCGGGGAATGGACTGAATCCTCGTATAAGATATATGACAATGTTTTGCTCGAGAAGTCTAATTGTTCTCTGGAAGTTCAATATGTCAATGTCACTGCCTCATACTTTAGGCCTGAGCTGTGGAAAAAGGCACCACGTAGACAATGCTGCGACATAATCAAAGGCACAGATGAAGGGAGCAATGTGGTCGAAATCGTGATCAGAGGCTGTCATCAATTTGAGAGTGTCACTCCTCCTTAA 1500 0.4553 MSLASSFLKVHQYYLTKAWKTLAFPTIKLTNLLSLFLKTSLALCTCFIISLFFYLSLSLYHHNYNYSPFQHPYHFIISHDPSTFENNNEPTNISHIVFGMGGSAKSWQDHRHYTEVWWQPNVTRGFMWLEQEPLVLAKETWPETLPPYKVSGVTSSFMYTNKVGLQFAIHLARILKETFQLGLENVRWFVMGDNDTVFFTENLVTVLAKYDHNEMYYIEDNSESVEQNVAQTYGMAFGGGGFAISYPLAEVLVKILDGCINRYAVLFGSDQKVHACMSEIGVQLTKEPGFHQTDGLLAANPIAPLVSLHHLHASEPLFRDTGRVESLKRFVSAYKMDPGRILQKSICYDPNRNWTFSVSWGYNVELYRSLETSIELQTTFKTFQTWRGYEDPFTFNTRPVIPDQCKRPVVFFLDQIEDGGLGEWTESSYKIYDNVLLEKSNCSLEVQYVNVTASYFRPELWKKAPRRQCCDIIKGTDEGSNVVEIVIRGCHQFESVTPP 499
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma01g01013 499 PANTHER FRINGE-RELATED 27 496 - -
Gma01g01013 499 Pfam Protein of unknown function, DUF604 227 470 IPR006740 -
Gma01g01013 499 PANTHER GLYCOSYLTRANSFERASE 27 496 - -
Gma01g01013 499 Gene3D - 83 354 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma01g01013 Gma-Chr1 35458052 35462812 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma01g01013 86 498 Glycosyltransferase AT2G37730 53.630 2.32e-167 481
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma01g01013 - - gmx:100803539 1024.23
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma01g01013 01 35458052 35462812 Gma18g00337 18 2822899 2827369 ECH
Gma01g01013 01 35458052 35462812 Gma11g02240 11 37732032 37740224 ECH
Gma01g01013 01 35458052 35462812 Gma01g01013 01 35458052 35462812 ECH