Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma01g01008 ATGGCAGGAAACATGGGGTGGGGTGTGATAGAAGAGGAGGGATGGAGGAAGGGACCTTCGACTTCTGAGGAGGACATTCTGTATGTCAAGTTCCATGGTGAGGGCAGATGGAACTCTGCTGCTAGGCTTGCAGTGAATTACCTGAGGCCAGACCTCAAGAAGGGTCAAATAACACCACAAGAAGAAAGCATAATTCTACAGCTGCATGTTAGGTGGGGAAACAGGTGGTCAACAATTGCAAGAAGCTTGCCAGGAAGAATTGACAATGAGATAAAGAATTATTGGAGGACTCACTTCAAGAAAAAGATAAGGGCTCACTTCCGCTAA 327 0.4648 MAGNMGWGVIEEEGWRKGPSTSEEDILYVKFHGEGRWNSAARLAVNYLRPDLKKGQITPQEESIILQLHVRWGNRWSTIARSLPGRIDNEIKNYWRTHFKKKIRAHFR 108
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma01g01008 108 PANTHER MYB TRANSCRIPTION FACTOR 1 104 - -
Gma01g01008 108 ProSiteProfiles Myb-like domain profile. 49 99 IPR001005 -
Gma01g01008 108 Gene3D - 58 103 - -
Gma01g01008 108 SUPERFAMILY Homeodomain-like 45 104 IPR009057 -
Gma01g01008 108 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 49 103 IPR017930 -
Gma01g01008 108 Pfam Myb-like DNA-binding domain 54 98 IPR001005 -
Gma01g01008 108 PANTHER MYB TRANSCRIPTION FACTOR-RELATED-RELATED 1 104 IPR044676 GO:0003700|GO:0006355|GO:0043565
Gma01g01008 108 CDD SANT 58 99 IPR001005 -
Gma01g01008 108 SMART sant 53 101 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma01g01008 Gma-Chr1 35176001 35176745 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma01g01008 12 105 MYB Transcription Factor Family AT3G24310 70.909 7.52e-49 154
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Gma01g01008 Myb_DNA-binding 3.5e-12 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma01g01008 K09422 - gmx:100810254 207.223