Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma01g00999 ATGGCCACCAAACTCAACATGCTCCTCAAGCTCCTGCCTTTGTTGGTGTTCCTTCTGATCCCAGTTTCATCTCAGCCAAACCAGCTCTTCTATGCTGGATTCAAGGGTCTGGGAAGCAACAACATGACCCTTGATGGGGTTGCAGAAATAGAGCCAAATGGGGTACTGAAACTCACAAATGATTCAAGTAAAGTGATGGGTCATGCTTTTTATCCAACCCCTTTTCGGTTCAAGAACTCTAGTGGTGGTAAAGCTTTCTCCTTTTCTTCCTCTTTTGCTTTGGCTATTGTTCCTGAGTTTCCAAAGCTAGGAGGGCATGGCCTTGCTTTTACAATTGCTCCTTCTAAGGATCTGAAGGCTCATCCAAGCCAATATCTTGGTATTCTTGACTCAAGTAACATAGGGAACTTCTCCAACCACCTCTTTGCTGTTGAGTTTGACACAGCAAAGGATTTTGAGTTTGGGGACATTGATGACAACCATGTTGGAATTGACATCAATAGCTTGGCCTCCAATGCCTCTGCATCTGCAGGTTACTACACTGGGGATGATGATTCAAGCAAACAGAATCTCACCCTCCAAAGTAGGGTACCTATTCTAGCTTGGGTTGATTATGATGCTGCTAAAAGTGTGGTCCATGTCACGATTTCTGCATCTTCTACCAAACCCAAAAGGCCACTCTTGTCCTATCATGTGGATCTTTCACCAATCCTTAAGGAATCCATGTATGTTGGGTTCTCTGCATCAACAGGGTTGCTTGCTAGCTCCCATTACATCTTGGGATGGAGCTTCAAAATCAATGGGCCAGCTCCACCCCTTGATCTCTCTTCTCTCCCACAGCTTCCAGGGCCAAAGAAGAAACACACATCTCTGATAATTGGGGTTTCAGTCTCTGTTGTTGTTCTTGCATTGTGTGCTGTCTTATTTGGCATCTACATGTACAGAAGGTACAAGAATGCTGATGTCATAGAAGCTTGGGAGCTTGAGATTGGGCCACATAGGTACTCCTACCAAGAGCTCAAGAAAGCAACAAAAGGGTTCAAGGACAAAGAGCTGCTTGGACAAGGTGGGTTTGGGAGTGTTTACAAAGGAACATTGCCAAATTCCAATACCCAGGTTGCTGTTAAGAGAATTTCACATGACTCCAATCAAGGCCTGAGGGAATTTGTATCAGAAATAGCCAGCATAGGCCGGCTTCGCCACCGGAATTTGGTTCAGTTGCTGGGGTGGTGTCGCCGCCTGGGTGACCTCCTCCTTGTGTATGATTTCATGGAAAATGGGAGCTTAGACAAGTACTTGTTTAACGAGCCAGAAACAATCCTAAGTTGGGAGCAAAGGTTTAAGGTCATCAAGGATGTTGCTTCAGCCCTTTTGTATCTTCACGAGGGCTATGAGCAGGTGGTGATACATAGAGATGTGAAGGCTAGCAATGTGCTTCTAGACGGTGAACTCAATGGAAGACTAGGAGATTTTGGATTAGCAAGGTTGTATGAACATGGGACTAATCCAAGTACCACAAGGGTGGTGGGGACCTTGGGCTATTTGGCACCTGAGGTGCCTAGGACAGGGAAGGCCACTCCTAGCTCAGATGTTTTTGCATTTGGTGCACTTTTACTAGAGGTGGCATGTGGGCTAAGACCACTTGAGCCAAAGGCAATGCCAGAAGATATGGTTTTGGTTGATTGTGTGTGGAACAAATTCAAACAAGGGAGAATACTCAATATGGTGGACCCTAAACTAAATGGTGTTTTTAATGAAAGAGAGATGCTCATGGTGTTGAAATTGGGGCTTCTGTGTTCAAATGGTTCACCCACTGCTAGGCCTAGCATGAGACAGGTGGTGAGGTTTTTGGAAGGAGAAGTTGGTGTGCCAGATGAGTTGAGAAAGCCGGGAGAGGGAGGTTACCAGGAGGGTTTTGATGAATTCTTGCACTCACTTGAATCTTCTTCGTTTGATCAGATGAACACAGGTTCCTATGGTAGAAACAGAGACATGGATTCTAGTTTTCCATCTTTAACTGCCGCTTATTTGCTCCTTGCACCCCCAATGTATAAAAATATTTGCAGCCTCACTCTTCCGACCAGTACTGCCCACAGCCTCACCAAGGGCATTGGTGGTGTTGCACCTTCTGCTGTTGGCTAA 2142 0.4561 MATKLNMLLKLLPLLVFLLIPVSSQPNQLFYAGFKGLGSNNMTLDGVAEIEPNGVLKLTNDSSKVMGHAFYPTPFRFKNSSGGKAFSFSSSFALAIVPEFPKLGGHGLAFTIAPSKDLKAHPSQYLGILDSSNIGNFSNHLFAVEFDTAKDFEFGDIDDNHVGIDINSLASNASASAGYYTGDDDSSKQNLTLQSRVPILAWVDYDAAKSVVHVTISASSTKPKRPLLSYHVDLSPILKESMYVGFSASTGLLASSHYILGWSFKINGPAPPLDLSSLPQLPGPKKKHTSLIIGVSVSVVVLALCAVLFGIYMYRRYKNADVIEAWELEIGPHRYSYQELKKATKGFKDKELLGQGGFGSVYKGTLPNSNTQVAVKRISHDSNQGLREFVSEIASIGRLRHRNLVQLLGWCRRLGDLLLVYDFMENGSLDKYLFNEPETILSWEQRFKVIKDVASALLYLHEGYEQVVIHRDVKASNVLLDGELNGRLGDFGLARLYEHGTNPSTTRVVGTLGYLAPEVPRTGKATPSSDVFAFGALLLEVACGLRPLEPKAMPEDMVLVDCVWNKFKQGRILNMVDPKLNGVFNEREMLMVLKLGLLCSNGSPTARPSMRQVVRFLEGEVGVPDELRKPGEGGYQEGFDEFLHSLESSSFDQMNTGSYGRNRDMDSSFPSLTAAYLLLAPPMYKNICSLTLPTSTAHSLTKGIGGVAPSAVG 713
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma01g00999 713 ProSiteProfiles Protein kinase domain profile. 347 617 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma01g00999 713 CDD STKc_IRAK 353 619 - -
Gma01g00999 713 ProSitePatterns Protein kinases ATP-binding region signature. 353 376 IPR017441 GO:0005524
Gma01g00999 713 PANTHER L-TYPE LECTIN-DOMAIN CONTAINING RECEPTOR KINASE S.4 9 669 - -
Gma01g00999 713 Pfam Legume lectin domain 30 278 IPR001220 GO:0030246
Gma01g00999 713 CDD lectin_legume_LecRK_Arcelin_ConA 31 268 IPR001220 GO:0030246
Gma01g00999 713 SMART serkin_6 347 617 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma01g00999 713 Gene3D Phosphorylase Kinase; domain 1 332 423 - -
Gma01g00999 713 Pfam Protein kinase domain 347 557 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma01g00999 713 Gene3D - 29 267 - -
Gma01g00999 713 SUPERFAMILY Concanavalin A-like lectins/glucanases 34 286 IPR013320 -
Gma01g00999 713 Gene3D Transferase(Phosphotransferase) domain 1 424 629 - -
Gma01g00999 713 SUPERFAMILY Protein kinase-like (PK-like) 329 625 IPR011009 -
Gma01g00999 713 ProSitePatterns Serine/Threonine protein kinases active-site signature. 468 480 IPR008271 GO:0004672|GO:0006468
Gma01g00999 713 PANTHER - 9 669 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma01g00999 Gma-Chr1 34975564 34979822 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma01g00999 22 665 Receptor kinase-like Gene Family AT3G55550 58.896 0.0 747
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Gma01g00999 Pkinase 4.3e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma01g00999 - - gmx:100801247 1278.46
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma01g00999 01 34975564 34979822 Gma18g00344 18 2896926 2898992 ECH
Gma01g00999 01 34975564 34979822 Gma11g02234 11 37665904 37668257 ECH
Gma01g00999 01 34975564 34979822 Gma01g00999 01 34975564 34979822 ECH