Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma01g00974 ATGTCAACCTCAAGAACCTCATCAGATACACCCTTCAAAGGATATGATCCTAGCCAAACTCAAATGTGTCTTTCTCTCCTCCAACGCAACACTTCTCCTTGGGGTGAGAGGAGAGGCAGAAGGAAGCAAGCAGAACCAGGGAAGTTCCTTGGTGTGAGGAGGCGCCCTTGGGGTCGATATGATGCTGAAATTAGAGACCCCACAACCAAAGAGAGGCATTAG 222 0.491 MSTSRTSSDTPFKGYDPSQTQMCLSLLQRNTSPWGERRGRRKQAEPGKFLGVRRRPWGRYDAEIRDPTTKERH 73
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma01g00974 73 Gene3D AP2/ERF domain 47 73 IPR036955 GO:0003700|GO:0006355
Gma01g00974 73 MobiDBLite consensus disorder prediction 34 50 - -
Gma01g00974 73 PANTHER AP2 DOMAIN CLASS TRANSCRIPTION FACTOR 1 73 - -
Gma01g00974 73 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF086 1 73 - -
Gma01g00974 73 MobiDBLite consensus disorder prediction 30 50 - -
Gma01g00974 73 ProSiteProfiles AP2/ERF domain profile. 48 73 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma01g00974 Gma-Chr1 34387497 34387718 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma01g00974 1 73 AP2-EREBP Transcription Factor Family AT5G18560 64.198 1.76e-25 94.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma01g00974 - - gmx:100812047 148.673