Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma01g00937 ATGCTTCGCGGTGCCGTTGGGGATCTACGACGCATGCTTGACCAGTACGTGGAGAGTGACACTGTTGTTGATAACGAGAAGGTGTATAAGGTTCAGATGGAGGAGGCACTACCGCTGTCCAATAGCCACGAGAAATTGGTTTGGCCAGTTGTCCGATTGCAGGAGAGGAATATTGTCCTCACGAGGATTAATCCTGAGGGTTTAAGTTTGGGGTTTTGGGAATTGGTGAAATTTGATGAGAGGCGAAGCTTGGGGGTTTTGGGAATAGgtgaaatttgcttagaATTTCAAGATGAACTTGAGACAAATAAGTTAATGGACAACAAAGAAAGTCACTTGCCGATGGTGTCCTTTGATGGAGTGAGCGATAAACAGAAGGGTGGAAAGGATGCAATAGGCAAGTCCTCTGATGGAAGAGAACTTTCAAGGGTCTTTACTGAGGATTATGATGCAGCAGAGATTTCGGTATTGGATCCTATGGGAAATAGAGTAAATACATGGAACAAAATCTTCTTAGCTGCTTGTTTGCTTTAG 534 0.4307 MLRGAVGDLRRMLDQYVESDTVVDNEKVYKVQMEEALPLSNSHEKLVWPVVRLQERNIVLTRINPEGLSLGFWELVKFDERRSLGVLGIGEICLEFQDELETNKLMDNKESHLPMVSFDGVSDKQKGGKDAIGKSSDGRELSRVFTEDYDAAEISVLDPMGNRVNTWNKIFLAACLL 177
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma01g00937 177 PANTHER RNA POLYMERASE II C-TERMINAL DOMAIN PHOSPHATASE-LIKE 1 10 66 - -
Gma01g00937 177 PANTHER RNA POLYMERASE II CTD PHOSPHATASE 10 66 IPR039189 GO:0008420|GO:0070940
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma01g00937 Gma-Chr1 30899565 30901345 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma01g00937 133 177 Ion Channels AT2G28260 48.889 1.15e-08 51.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma01g00937 K18998 K05391 gmx:100804375 152.14