Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma01g00936 ATGGGTGCTGGAGGCCCTGATGATGAGGACAACAACAGGTGGCCACCGTGGCTGAAGCCTCTGCTAAAAGAAAGTTTCTTTGTTCAATGCAAGCTTCACGCTGATTCGCACAAGAGCGAGTGCAACATGTACTGCTTGGATTGTATGAACGGTGCTCTCTGCTCTCTCTGCCTCGCTTACCATAAAGATCATCGTGCTATTCAGATAAGGAGGTCCTCATACCATGATGTGATTAGGGTGAATGAGATTCAGAAGGTGTTGGACATCACAGGGGTCCAAACCTACATTATCAACAGCGCGAGGGTTGTTTTCTTGAATGAGAGGCCGCAGCCAAGGCCTGGTAAAGGTGTCACCAACACTTGTGAAGTCTGCGAGCGTAGCCTTCTTGATTCCTACCGATTCTGTTCTCTAGGTTGTAAGATTGTTGGGACTTCAAGGAACTTCCTGAAGAAAAAGTCAGCGGCAATGGTATCAGACTCAGAGGATTCTTACAGCAGCAACAGCAGCCATGGGAAGAAGAACAGCTTCACACCTTCCACACCGCCACCAACTTTTGTTAATTACAGAACGGCCAAGAGAAGAAAGGGAATTCCACACCGTGCCCCAATGGGAGGGCTAGTCATAGAATACTAG 633 0.4818 MGAGGPDDEDNNRWPPWLKPLLKESFFVQCKLHADSHKSECNMYCLDCMNGALCSLCLAYHKDHRAIQIRRSSYHDVIRVNEIQKVLDITGVQTYIINSARVVFLNERPQPRPGKGVTNTCEVCERSLLDSYRFCSLGCKIVGTSRNFLKKKSAAMVSDSEDSYSSNSSHGKKNSFTPSTPPPTFVNYRTAKRRKGIPHRAPMGGLVIEY 210
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma01g00936 210 Pfam PLATZ transcription factor 70 141 IPR006734 -
Gma01g00936 210 PANTHER PLATZ TRANSCRIPTION FACTOR FAMILY PROTEIN 3 206 - -
Gma01g00936 210 MobiDBLite consensus disorder prediction 160 186 - -
Gma01g00936 210 PANTHER PLATZ TRANSCRIPTION FACTOR FAMILY PROTEIN 3 206 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma01g00936 Gma-Chr1 30678946 30681445 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF PLATZ Gma01g00936 PLATZ 5.3e-30 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma01g00936 - - gmx:100777527 426.017
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma01g00936 01 30678946 30681445 Gma09g01905 09 44661737 44663445 GST