Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma01g00935 ATGCCAATGATTGATCTGTTACCTACTGCTTACAGGGATGCTGGCAGTGGAATTGCACAGAAAAATCTTAAGCGTGTGAAGAAAGCCTGGGGTCAAGGAAACACTGAATTTGAAGCCAAGGTTGCTGATTTCGGTTTTGCTAACTTCATACGAGACGGTGTTTCTGGGTGCTGTGATGTTTACAGTTTTGGGATTTTTCTTTTGGAGATTGTGAGTGCCAACAAACCAATTGACAAACTCCCTAGTGGAGTGAAAAGGGACTTAGTTCAATGGGTCACACCACATGTCCAAAAGGGTAACTTCATTCATATTGCAGATCCAAAGTTGAAGGGGCATTTTGATTTACAGCAATTGAAATCTGTGGTCATCATAGCTATGAGGTGCACAGATAATAGCCCAGAGAAGAGGCCTAGCATGCAAGAGGTGGTGGAGTGGCTGAAGGCCATATGTGCAGTCTTGATGGCTCCACATCAGGCTAGCACACAGGGAAAGTGGAACAAGATTAGGGGTGGGGGTGCCTTCCCTGCTCAGGAGGAAGGAATGTGGAGTCCTGTATTTCTAAATGGCCGCCGCTTGTCTTCTCTTGAGGTTGATTTTCGTCTGTGTTCTTTTCACATTAGACATCCTTTATTTCTAAATGGGCAGATTCTTCTTGTGGGTTTGGATTCTCAACCAAAAGAAATGGTCTTAAAAGAGCTAGCTAAATTTGTTTTTGGCTCTTACAGTAACTTTGTTTCCTTTGCTATAAGTAGTTTCTCTTCCACTCATGAGAAGTCCAAAAGTAAAAGAAAAACAGATGAGTTTGGTTGCAGTTATGTTCACAGGTTTGGGGAAGCACTGAATGAGAACCCTCATAGGGTGTTCTTCTTGGAAGATTTGGAGCAAGTTGATCATTTTTCCATCAAATTCATTGTTAAGATAATTTCATGGTTGAATTGA 939 0.4196 MPMIDLLPTAYRDAGSGIAQKNLKRVKKAWGQGNTEFEAKVADFGFANFIRDGVSGCCDVYSFGIFLLEIVSANKPIDKLPSGVKRDLVQWVTPHVQKGNFIHIADPKLKGHFDLQQLKSVVIIAMRCTDNSPEKRPSMQEVVEWLKAICAVLMAPHQASTQGKWNKIRGGGAFPAQEEGMWSPVFLNGRRLSSLEVDFRLCSFHIRHPLFLNGQILLVGLDSQPKEMVLKELAKFVFGSYSNFVSFAISSFSSTHEKSKSKRKTDEFGCSYVHRFGEALNENPHRVFFLEDLEQVDHFSIKFIVKIISWLN 312
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma01g00935 312 Pfam Protein tyrosine and serine/threonine kinase 58 145 IPR001245 GO:0004672|GO:0006468
Gma01g00935 312 Gene3D - 192 309 IPR027417 -
Gma01g00935 312 PANTHER OS01G0750732 PROTEIN 54 152 - -
Gma01g00935 312 SUPERFAMILY Protein kinase-like (PK-like) 36 159 IPR011009 -
Gma01g00935 312 Gene3D Transferase(Phosphotransferase) domain 1 50 162 - -
Gma01g00935 312 PANTHER - 54 152 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma01g00935 Gma-Chr1 30546748 30552402 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma01g00935 32 146 Receptor kinase-like Gene Family AT3G45420 35.043 3.60e-17 80.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-XV Gma01g00935 PK_Tyr_Ser-Thr 2e-05 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma01g00935 - - gmx:113002208 206.068