Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma01g00926 ATGGCAACCTGTAAGCACAAATATTTCTCTGGGCATACTAGAAACCCAGATGGAAGTGTTCAATTTATAGTGGGCAAGACCAAAGTTGGTGATGCTATTGATGGAGTAATTAAGATATTCACTGTCACGGTATGTGCATTGATACTAGACTACCTGAACATATATGCTCCATTGAATATGCAGGTCACCATTGTAGTAGTTGCAGTGCATGAAGGGCTACCTTTAGCAATGGCTGTGGTTGAGGCTTGGATTGGTGGTGGGAAGAAGATTGTTGATCCTCATGATGTATCACAGTTCTCTCGTATGCTCTGCTATTTGTTGATTGAAGGTGGTGGTAATGATGTTAAGGTTTCTGAATCACCAACAGAAAAGGCAATATTAGAGTGGGGAATTAATTATTCATTAAATTTTTTGGCTTGCAAATGTCAACTTTTATACTGGTCATTACAAGAGGATAATCTTGTTTTATTGGCTATTATTGGCCTAAAGGATCCTTGTCTACCTGGTGTCAAAGATGCAATACAGCTTTGCCAAAAGGCTGGGGTTGAGGTCGAAGATGTTGAAGGGGTCGAATTTTGTGGAACTCTAAAAAATGTAGTGGCCATAGCTGCAGGTTTTGCTGATGGCTTGGAGATGGGAAATAATACAAAAATTCTAAAAGAGAGTTCAGATGGACCTGATGCTGTAACTATCGATCAACATGAAACAAAGAGTGGGCTATTTGATTTGAAACTTACTGCCCTAGATCAGCACAAGAAGACTATATTGGTTAATGATATTGTCAGGGTGCTGGAGGGTCCAACTAAGGTCTGA 813 0.3985 MATCKHKYFSGHTRNPDGSVQFIVGKTKVGDAIDGVIKIFTVTVCALILDYLNIYAPLNMQVTIVVVAVHEGLPLAMAVVEAWIGGGKKIVDPHDVSQFSRMLCYLLIEGGGNDVKVSESPTEKAILEWGINYSLNFLACKCQLLYWSLQEDNLVLLAIIGLKDPCLPGVKDAIQLCQKAGVEVEDVEGVEFCGTLKNVVAIAAGFADGLEMGNNTKILKESSDGPDAVTIDQHETKSGLFDLKLTALDQHKKTILVNDIVRVLEGPTKV 270
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma01g00926 270 PRINTS NAD-dependent glycerol-3-phosphate dehydrogenase signature 179 203 IPR006168 GO:0004367|GO:0006072|GO:0009331
Gma01g00926 270 PRINTS NAD-dependent glycerol-3-phosphate dehydrogenase signature 23 40 IPR006168 GO:0004367|GO:0006072|GO:0009331
Gma01g00926 270 PRINTS NAD-dependent glycerol-3-phosphate dehydrogenase signature 204 228 IPR006168 GO:0004367|GO:0006072|GO:0009331
Gma01g00926 270 PANTHER CALCIUM-TRANSPORTING ATPASE 77 140 - -
Gma01g00926 270 PANTHER CATION TRANSPORTING ATPASE 7 81 - -
Gma01g00926 270 PANTHER CATION TRANSPORTING ATPASE 77 140 - -
Gma01g00926 270 PANTHER CALCIUM-TRANSPORTING ATPASE 7 81 - -
Gma01g00926 270 Pfam NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus 186 217 IPR006109 GO:0004367|GO:0005975
Gma01g00926 270 PANTHER CATION TRANSPORTING ATPASE 144 192 - -
Gma01g00926 270 Gene3D - 186 220 IPR013328 GO:0016491
Gma01g00926 270 SUPERFAMILY 6-phosphogluconate dehydrogenase C-terminal domain-like 185 218 IPR008927 -
Gma01g00926 270 PANTHER CALCIUM-TRANSPORTING ATPASE 144 192 - -
Gma01g00926 270 ProSitePatterns NAD-dependent glycerol-3-phosphate dehydrogenase signature. 194 215 IPR006168 GO:0004367|GO:0006072|GO:0009331
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma01g00926 Gma-Chr1 30131707 30137785 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma01g00926 143 189 Primary Pumps ATPases AT5G57110 61.702 1.38e-12 65.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma01g00926 K01537 - gmx:100790157 159.844