Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma01g00910 ATGATGAAGAAAGAGTTAAAAAAATCATTGAAAGTAGAGCTATCTCATATTGCATCACATCAGTCAGCCCCTATTAAGGCGCCAGAAATACAAGCTCTACTTGGGCGTGTTAGCACAAAGGGTAGCTGCGCTGGACCTGAAGGAAGCGGATTACTTAAAGAGCTTTTGAGTGGTGGTGACGATCTGATGGGCTTGTTCGTGGTCGTAGGACCCGATAAGCCTCCATCAAAGTCTGTTGGACAGCTGAACAGGTTAACATCTGTGGCCACAGATGACCCATTGGGAGAATTGGTTAAGAAGTCATATGTGGTTTACACAAAGCCAATGGAGTTGGCATGGGACGAGGCGAAATTTGGGTTACCTAATGCCTCAAATGTAATCTCCAAGGCAAGGACAATGCACCTCCACCTCCACCTCAATGGATTGAGGCTAAGGTCAGCGTTTGACATGTTCCTGCTTGGGTCGTTCAGTCCGCCGCAACCTTCTCATACATTGGTCCAAGAAATCATCGGAAAAGCTCCTCAGGATGCATTGGGTAACCAAGCAGAGCATGCATTAGCCTCTCTGGCATCGATGATGTTGGAATCTCCTTCCTTCATAGTCCAATTTACACATGGTTTGAATTTGAGTCTAAGCTCTAAGGAATATACTCATGGAGTTGTGATTCGATTTCGATCCGTTGAGGCATTTGAGATATTTATAAACAGCAAAGAGTACAAAAATCATTTGAAGCAAGAGGCAGCAAACATGATGAAGAAGATTGGCCTTCTTAAAGCTGCAAAACGGAAGTTCTTGGGGGAAGGGTTGGGGGCTTGTTCCATTGAGGAACTGCAATGGATAGAACAACAGTTGGAGAGGAGTTTAAGTAATGTTAGAGCCAGAAAGATCCAGGTTTTCAAAGAACAAATCGAGCAACTAAAAGAAAAGGAAAAAGTCCTACTTGATGAAAATGCCAAGCTCACTGAAAATGGCAGGCTCTTTGAGAAGGTGAAGTTACTGCTATTTGGAATTAATTTTGTGTGGCCTATAGTTCATTTGGATAATATTTTAAAGCAGATAGAAGCAGTGGCAAATTATCAAGGGGACATTTACATGGGCAAACCATTAGACGGTGACAAAATAACAGGAGCTACCAATCATAAATCCGTGAATTTGGAGGGAAGCCTGTTGGTTCAGCACCTATTCAAGGACCACAGAAGATGTAGTTACATGATAGCCAATGCACTGGATAAGGATGGTAAATTCACTACTGCCCAAGTCTCTCGAAAACTTAAGCAACTTGGTTTGTATCTTCCTCTGAAGAGTTCTGGAGGAAAAATGCACCCAAAGGGTGCAGATCTCATGGATCGTTCAAATGAAAGGATGGATGAATCTGATGATGAGACATTGGTATCACTGGTAAAAAGGAAGAAAATGGAGAGTGGCAAATTATCAAGGGGACAGTTACATGGGCAAACCAGTGAGGATAAATTGTCAAAAGGCGATTCTGATGATGAAATGCTCAGCTCTGTTCTCAAGAAAAAAATAAATAGTAAAGTATCAATTGAACAATTACTTGAACCCATTAATGTGGATTCATCGTCAAGAGATGATTCTGATGATGAAATGCTCAGCTCTGCTCTCAAAAGAACTAGACGACCATCTCTTAAATCAAAGCAAGTTGAGCTTGAAAATATCCAAATTCATGAGAGAATAATGGGCGACGATTCTTTCAATGGAGGCATAATAGAGGTTTCGGAAGGAAAGATGCTAAAGAAAATGAAAAAGCAACCCCTCTTGTTTGTGGAACTCCTTTTCTGGAAGACTCGGAGGGAATGCCATTACATCAATGCTGAATATTTGTTGAGCGAGCTTGGTCATTTGAAGAAAGAAAGTGCCAATTGGAATAACACTCAGGGAGATGAAGAAATTGGTTCATCCCCAGCAAAGGTGTGGACACAGGATATCAAAAAGACAAGCTTGATGTTATTAAAGGCTTTGCACCTACCTCTGGCAGTAACAGTGACAAAGATGATCATAACCCAAAATCGTGAGCACACCAAGGAGGAGAACCCAAAAATTCTACACCTTTGCATGCTTCCATTGTTGGAGTCTTGGCTAAACCTCAACAAGCTTGCACCCTTGTCTTCCTATTCTAATTTCCATATCCAGCTCTTCAAGTATGCCAATGATGAGATCTCCACAAACCTATCAACTTCATACATGGAAAAAGGACAAGAGAATAAGCATCCACACAAG 2238 0.416 MMKKELKKSLKVELSHIASHQSAPIKAPEIQALLGRVSTKGSCAGPEGSGLLKELLSGGDDLMGLFVVVGPDKPPSKSVGQLNRLTSVATDDPLGELVKKSYVVYTKPMELAWDEAKFGLPNASNVISKARTMHLHLHLNGLRLRSAFDMFLLGSFSPPQPSHTLVQEIIGKAPQDALGNQAEHALASLASMMLESPSFIVQFTHGLNLSLSSKEYTHGVVIRFRSVEAFEIFINSKEYKNHLKQEAANMMKKIGLLKAAKRKFLGEGLGACSIEELQWIEQQLERSLSNVRARKIQVFKEQIEQLKEKEKVLLDENAKLTENGRLFEKVKLLLFGINFVWPIVHLDNILKQIEAVANYQGDIYMGKPLDGDKITGATNHKSVNLEGSLLVQHLFKDHRRCSYMIANALDKDGKFTTAQVSRKLKQLGLYLPLKSSGGKMHPKGADLMDRSNERMDESDDETLVSLVKRKKMESGKLSRGQLHGQTSEDKLSKGDSDDEMLSSVLKKKINSKVSIEQLLEPINVDSSSRDDSDDEMLSSALKRTRRPSLKSKQVELENIQIHERIMGDDSFNGGIIEVSEGKMLKKMKKQPLLFVELLFWKTRRECHYINAEYLLSELGHLKKESANWNNTQGDEEIGSSPAKVWTQDIKKTSLMLLKALHLPLAVTVTKMIITQNREHTKEENPKILHLCMLPLLESWLNLNKLAPLSSYSNFHIQLFKYANDEISTNLSTSYMEKGQENKHPHK 746
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma01g00910 746 Coils Coil 274 294 - -
Gma01g00910 746 MobiDBLite consensus disorder prediction 443 477 - -
Gma01g00910 746 Coils Coil 296 323 - -
Gma01g00910 746 MobiDBLite consensus disorder prediction 526 541 - -
Gma01g00910 746 ProSiteProfiles K-box domain profile. 240 333 IPR002487 GO:0003700|GO:0005634|GO:0006355
Gma01g00910 746 PANTHER PROTEIN TIMELESS HOMOLOG 581 651 - -
Gma01g00910 746 PANTHER PROTEIN TIMELESS HOMOLOG 283 551 - -
Gma01g00910 746 MobiDBLite consensus disorder prediction 524 549 - -
Gma01g00910 746 SUPERFAMILY Dimeric alpha+beta barrel 180 244 IPR011008 -
Gma01g00910 746 MobiDBLite consensus disorder prediction 440 497 - -
Gma01g00910 746 PANTHER TIMEOUT/TIMELESS-2 581 651 IPR044998 -
Gma01g00910 746 PANTHER TIMEOUT/TIMELESS-2 283 551 IPR044998 -
Gma01g00910 746 Pfam K-box region 240 322 IPR002487 GO:0003700|GO:0005634|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma01g00910 Gma-Chr1 29048824 29072680 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma01g00910 236 311 MADS-box Gene Family AT2G45660 72.368 1.32e-27 107
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma01g00910 - K03155 gmx:100796385 372.859