Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma01g00890 ATGATTTTTAGACTGCAAGGTTTGACATTGAGTTTTGGTGGTGTTTGGATTTTGGCCACAAGGTTGAAAGAGACAGGTTGTGGAGTTAAAGAGACAAAGAACTGGGCATCCACTTCAACCTGCACTGGACATGCAGATGTCTGTAATTACTCTAGGCTCTCTGTTAACGCATACGAACTTCTTCTAGCTGGTCATCAATATTTGGATGTAAGGACTCCAGAAGAGTTCAATGCTGGACACGCTCCTGGCGCAATTAACATACCTTATATGTTCAGAGTTGGATCAGGTTTTATTTCAATTCTTAAATAG 309 0.4078 MIFRLQGLTLSFGGVWILATRLKETGCGVKETKNWASTSTCTGHADVCNYSRLSVNAYELLLAGHQYLDVRTPEEFNAGHAPGAINIPYMFRVGSGFISILK 102
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma01g00890 102 PANTHER RHODANESE-LIKE DOMAIN-CONTAINING PROTEIN 15, CHLOROPLASTIC 33 97 - -
Gma01g00890 102 ProSiteProfiles Rhodanese domain profile. 61 90 IPR001763 -
Gma01g00890 102 CDD RHOD 57 90 - -
Gma01g00890 102 Pfam Rhodanese-like domain 66 87 IPR001763 -
Gma01g00890 102 Gene3D - 36 100 IPR036873 -
Gma01g00890 102 SUPERFAMILY Rhodanese/Cell cycle control phosphatase 58 89 IPR036873 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma01g00890 Gma-Chr1 28406014 28407683 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma01g00890 57 97 Sulfurtransferasese or Rhodanese AT4G35770 68.293 1.36e-15 65.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma01g00890 - - gmx:100499831 85.5001