Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma01g00865 ATGAACTTTTTTCTGAACTTGGTGATGGAATATGTCCCTGAGACGATCTTCCGTGTTATAAAGCACTACAGTAGCATGAAACAGAGAATTCCCCTAATCTATGTGAAATTATATACATATCAAATCTTTAGGGGACTGGCGTATATCCATACTGCACCAGGAATCTACCATAGACATGTGAAGCCTCAAAATCTTTTGATTGATCGACTCATACACCAAGTCAAGCTCTGCGATTTTGGGAGTGCAAAAGTTCTGATATTTTGA 264 0.3826 MNFFLNLVMEYVPETIFRVIKHYSSMKQRIPLIYVKLYTYQIFRGLAYIHTAPGIYHRHVKPQNLLIDRLIHQVKLCDFGSAKVLIF 87
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma01g00865 87 Pfam Protein kinase domain 5 85 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma01g00865 87 Gene3D Transferase(Phosphotransferase) domain 1 2 86 - -
Gma01g00865 87 ProSiteProfiles Protein kinase domain profile. 1 87 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma01g00865 87 PANTHER OS02G0236200 PROTEIN 3 86 - -
Gma01g00865 87 SUPERFAMILY Protein kinase-like (PK-like) 5 85 IPR011009 -
Gma01g00865 87 PANTHER GLYCOGEN SYNTHASE KINASE-3 ALPHA 3 86 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma01g00865 Gma-Chr1 27883210 27885117 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma01g00865 5 85 Core Cell Cycle Gene Families AT1G20930 38.272 4.63e-13 60.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_GSK Gma01g00865 Pkinase 4.6e-18 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma01g00865 K14502 - gmx:100806839 158.303